Analysis of interatomic Contacts of Structural Units in PDB entry:
7LQO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LQO entry

There are 3 chains in PDB entry 7LQO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6LYS 29
A
 GLY 31PHE 174
A
 SER 178ALA 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 7LQO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 174Right-handed 310
Helix 2
AA2
A
178 182Right-handed 310
Helix 3
AA3
A
190 195Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7LQO.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 253first strand
Strand 2
A
23 34anti-parallel
Strand 3
A
39 50anti-parallel
Strand 4
A
200 208anti-parallel
Strand 5
A
213 223anti-parallel
Strand 6
A
226 236anti-parallel
Strand 7
A
121 131parallel
Strand 8
A
134 145anti-parallel
Strand 9
A
150 159anti-parallel
Strand 10
A
77 87anti-parallel
Strand 11
A
60 71anti-parallel
Strand 12
A
13 20anti-parallel
Strand 13
A
23 34anti-parallel
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