Analysis of interatomic Contacts of Structural Units in PDB entry:
7LQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LQX entry

There is 1 chain in PDB entry 7LQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7LQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 22Right-handed 310
Helix 2
AA2
A
24 38Right-handed alpha
Helix 3
AA3
A
48 53Right-handed alpha
Helix 4
AA4
A
60 77Right-handed alpha
Helix 5
AA5
A
97 105Right-handed 310
Helix 6
AA6
A
111 130Right-handed alpha
Helix 7
AA7
A
143 148Right-handed 310
Helix 8
AA8
A
159 172Right-handed alpha
Helix 9
AA9
A
187 192Right-handed alpha
Helix 10
AB1
A
198 205Right-handed alpha
Helix 11
AB2
A
214 217Right-handed 310
Helix 12
AB3
A
218 224Right-handed alpha
Helix 13
AB4
A
227 245Right-handed alpha
Helix 14
AB5
A
265 267Right-handed 310
Helix 15
AB6
A
268 281Right-handed alpha
Helix 16
AB7
A
305 311Right-handed 310
Helix 17
AB8
A
321 335Right-handed alpha
Helix 18
AB9
A
360 364Right-handed 310
Helix 19
AC1
A
367 380Right-handed alpha
Helix 20
AC2
A
389 392Right-handed 310
Helix 21
AC3
A
393 401Right-handed alpha
Helix 22
AC4
A
414 420Right-handed alpha
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There are 3 sheets in PDB entry 7LQX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
A
135 139parallel
Strand 3
A
80 84parallel
Strand 4
A
42 45parallel
Strand 5
A
5 9parallel
Strand 6
A
286 291parallel
Strand 7
A
252 257parallel
Strand 8
A
209 213parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
93 94anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 387first strand
Strand 2
A
345 349parallel
Strand 3
A
404 406parallel
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