Analysis of interatomic Contacts of Structural Units in PDB entry:
7LQZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LQZ entry

There are 4 chains in PDB entry 7LQZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 111	LEU 779
B	LEU 111	LEU 779
C	LEU 111	LEU 779
D	LEU 111	LEU 779

There are132 helices in PDB entry 7LQZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	115	125	Right-handed alpha
Helix 2	AA2	A	133	141	Right-handed alpha
Helix 3	AA3	A	158	166	Right-handed alpha
Helix 4	AA4	A	174	185	Right-handed alpha
Helix 5	AA5	A	187	193	Right-handed alpha
Helix 6	AA6	A	198	202	Right-handed 310
Helix 7	AA7	A	206	211	Right-handed alpha
Helix 8	AA8	A	215	224	Right-handed alpha
Helix 9	AA9	A	252	260	Right-handed alpha
Helix 10	AB1	A	262	269	Right-handed alpha
Helix 11	AB2	A	288	296	Right-handed alpha
Helix 12	AB3	A	300	322	Right-handed alpha
Helix 13	AB4	A	326	330	Right-handed 310
Helix 14	AB5	A	337	345	Right-handed alpha
Helix 15	AB6	A	348	356	Right-handed alpha
Helix 16	AB7	A	396	403	Right-handed alpha
Helix 17	AB8	A	412	416	Right-handed 310
Helix 18	AB9	A	417	422	Right-handed alpha
Helix 19	AC1	A	423	429	Right-handed alpha
Helix 20	AC2	A	432	456	Right-handed alpha
Helix 21	AC3	A	470	499	Right-handed alpha
Helix 22	AC4	A	505	509	Right-handed 310
Helix 23	AC5	A	512	533	Right-handed alpha
Helix 24	AC6	A	536	541	Right-handed 310
Helix 25	AC7	A	542	553	Right-handed alpha
Helix 26	AC8	A	554	557	Right-handed 310
Helix 27	AC9	A	561	574	Right-handed alpha
Helix 28	AD1	A	578	601	Right-handed alpha
Helix 29	AD2	A	631	639	Right-handed alpha
Helix 30	AD3	A	640	645	Right-handed alpha
Helix 31	AD4	A	657	673	Right-handed alpha
Helix 32	AD5	A	675	713	Right-handed alpha
Helix 33	AD6	A	714	719	Right-handed alpha
Helix 34	AD7	B	115	125	Right-handed alpha
Helix 35	AD8	B	133	141	Right-handed alpha
Helix 36	AD9	B	158	166	Right-handed alpha
Helix 37	AE1	B	174	185	Right-handed alpha
Helix 38	AE2	B	187	193	Right-handed alpha
Helix 39	AE3	B	198	202	Right-handed 310
Helix 40	AE4	B	206	211	Right-handed alpha
Helix 41	AE5	B	215	224	Right-handed alpha
Helix 42	AE6	B	252	260	Right-handed alpha
Helix 43	AE7	B	262	269	Right-handed alpha
Helix 44	AE8	B	288	296	Right-handed alpha
Helix 45	AE9	B	300	322	Right-handed alpha
Helix 46	AF1	B	326	330	Right-handed 310
Helix 47	AF2	B	337	345	Right-handed alpha
Helix 48	AF3	B	348	356	Right-handed alpha
Helix 49	AF4	B	396	403	Right-handed alpha
Helix 50	AF5	B	412	416	Right-handed 310
Helix 51	AF6	B	417	422	Right-handed alpha
Helix 52	AF7	B	423	429	Right-handed alpha
Helix 53	AF8	B	432	456	Right-handed alpha
Helix 54	AF9	B	470	499	Right-handed alpha
Helix 55	AG1	B	505	509	Right-handed 310
Helix 56	AG2	B	512	533	Right-handed alpha
Helix 57	AG3	B	536	541	Right-handed 310
Helix 58	AG4	B	542	553	Right-handed alpha
Helix 59	AG5	B	554	557	Right-handed 310
Helix 60	AG6	B	561	574	Right-handed alpha
Helix 61	AG7	B	578	601	Right-handed alpha
Helix 62	AG8	B	631	639	Right-handed alpha
Helix 63	AG9	B	640	645	Right-handed alpha
Helix 64	AH1	B	657	673	Right-handed alpha
Helix 65	AH2	B	675	713	Right-handed alpha
Helix 66	AH3	B	714	719	Right-handed alpha
Helix 67	AH4	C	115	125	Right-handed alpha
Helix 68	AH5	C	133	141	Right-handed alpha
Helix 69	AH6	C	158	166	Right-handed alpha
Helix 70	AH7	C	174	185	Right-handed alpha
Helix 71	AH8	C	187	193	Right-handed alpha
Helix 72	AH9	C	198	202	Right-handed 310
Helix 73	AI1	C	206	211	Right-handed alpha
Helix 74	AI2	C	215	224	Right-handed alpha
Helix 75	AI3	C	252	260	Right-handed alpha
Helix 76	AI4	C	262	269	Right-handed alpha
Helix 77	AI5	C	288	296	Right-handed alpha
Helix 78	AI6	C	300	322	Right-handed alpha
Helix 79	AI7	C	326	330	Right-handed 310
Helix 80	AI8	C	337	345	Right-handed alpha
Helix 81	AI9	C	348	356	Right-handed alpha
Helix 82	AJ1	C	396	403	Right-handed alpha
Helix 83	AJ2	C	412	416	Right-handed 310
Helix 84	AJ3	C	417	422	Right-handed alpha
Helix 85	AJ4	C	423	429	Right-handed alpha
Helix 86	AJ5	C	432	456	Right-handed alpha
Helix 87	AJ6	C	470	499	Right-handed alpha
Helix 88	AJ7	C	505	509	Right-handed 310
Helix 89	AJ8	C	512	533	Right-handed alpha
Helix 90	AJ9	C	536	541	Right-handed 310
Helix 91	AK1	C	542	553	Right-handed alpha
Helix 92	AK2	C	554	557	Right-handed 310
Helix 93	AK3	C	561	574	Right-handed alpha
Helix 94	AK4	C	578	601	Right-handed alpha
Helix 95	AK5	C	631	639	Right-handed alpha
Helix 96	AK6	C	640	645	Right-handed alpha
Helix 97	AK7	C	657	673	Right-handed alpha
Helix 98	AK8	C	675	713	Right-handed alpha
Helix 99	AK9	C	714	719	Right-handed alpha
Helix 100	AL1	D	115	125	Right-handed alpha
Helix 101	AL2	D	133	141	Right-handed alpha
Helix 102	AL3	D	158	166	Right-handed alpha
Helix 103	AL4	D	174	185	Right-handed alpha
Helix 104	AL5	D	187	193	Right-handed alpha
Helix 105	AL6	D	198	202	Right-handed 310
Helix 106	AL7	D	206	211	Right-handed alpha
Helix 107	AL8	D	215	224	Right-handed alpha
Helix 108	AL9	D	252	260	Right-handed alpha
Helix 109	AM1	D	262	269	Right-handed alpha
Helix 110	AM2	D	288	296	Right-handed alpha
Helix 111	AM3	D	300	322	Right-handed alpha
Helix 112	AM4	D	326	330	Right-handed 310
Helix 113	AM5	D	337	345	Right-handed alpha
Helix 114	AM6	D	348	356	Right-handed alpha
Helix 115	AM7	D	396	403	Right-handed alpha
Helix 116	AM8	D	412	416	Right-handed 310
Helix 117	AM9	D	417	422	Right-handed alpha
Helix 118	AN1	D	423	429	Right-handed alpha
Helix 119	AN2	D	432	456	Right-handed alpha
Helix 120	AN3	D	470	499	Right-handed alpha
Helix 121	AN4	D	505	509	Right-handed 310
Helix 122	AN5	D	512	533	Right-handed alpha
Helix 123	AN6	D	536	541	Right-handed 310
Helix 124	AN7	D	542	553	Right-handed alpha
Helix 125	AN8	D	554	557	Right-handed 310
Helix 126	AN9	D	561	574	Right-handed alpha
Helix 127	AO1	D	578	601	Right-handed alpha
Helix 128	AO2	D	631	639	Right-handed alpha
Helix 129	AO3	D	640	645	Right-handed alpha
Helix 130	AO4	D	657	673	Right-handed alpha
Helix 131	AO5	D	675	713	Right-handed alpha
Helix 132	AO6	D	714	719	Right-handed alpha

There are 4 sheets in PDB entry 7LQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	376	first strand
Strand 2	A	379	383	anti-parallel
Strand 3	A	746	748	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	376	first strand
Strand 2	B	379	383	anti-parallel
Strand 3	B	746	748	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	371	376	first strand
Strand 2	C	379	383	anti-parallel
Strand 3	C	746	748	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	371	376	first strand
Strand 2	D	379	383	anti-parallel
Strand 3	D	746	748	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LQZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LQZ