Analysis of interatomic Contacts of Structural Units in PDB entry:
7LR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LR0 entry

There are 4 chains in PDB entry 7LR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 111	SER 778
B	LEU 111	SER 778
C	LEU 111	SER 778
D	LEU 111	SER 778

There are121 helices in PDB entry 7LR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	115	126	Right-handed alpha
Helix 2	AA2	A	133	141	Right-handed alpha
Helix 3	AA3	A	147	151	Right-handed 310
Helix 4	AA4	A	158	166	Right-handed alpha
Helix 5	AA5	A	167	171	Right-handed 310
Helix 6	AA6	A	173	185	Right-handed alpha
Helix 7	AA7	A	188	193	Right-handed alpha
Helix 8	AA8	A	205	213	Right-handed alpha
Helix 9	AA9	A	215	226	Right-handed alpha
Helix 10	AB1	A	252	259	Right-handed alpha
Helix 11	AB2	A	262	272	Right-handed alpha
Helix 12	AB3	A	288	297	Right-handed alpha
Helix 13	AB4	A	300	322	Right-handed alpha
Helix 14	AB5	A	326	330	Right-handed 310
Helix 15	AB6	A	337	346	Right-handed alpha
Helix 16	AB7	A	347	356	Right-handed alpha
Helix 17	AB8	A	396	404	Right-handed alpha
Helix 18	AB9	A	410	415	Right-handed alpha
Helix 19	AC1	A	417	430	Right-handed alpha
Helix 20	AC2	A	432	456	Right-handed alpha
Helix 21	AC3	A	470	499	Right-handed alpha
Helix 22	AC4	A	505	512	Right-handed alpha
Helix 23	AC5	A	512	534	Right-handed alpha
Helix 24	AC6	A	538	555	Right-handed alpha
Helix 25	AC7	A	556	558	Right-handed 310
Helix 26	AC8	A	561	573	Right-handed alpha
Helix 27	AC9	A	581	601	Right-handed alpha
Helix 28	AD1	A	631	645	Right-handed alpha
Helix 29	AD2	A	657	688	Right-handed alpha
Helix 30	AD3	A	690	714	Right-handed alpha
Helix 31	AD4	B	115	126	Right-handed alpha
Helix 32	AD5	B	133	141	Right-handed alpha
Helix 33	AD6	B	147	151	Right-handed 310
Helix 34	AD7	B	158	166	Right-handed alpha
Helix 35	AD8	B	167	171	Right-handed 310
Helix 36	AD9	B	173	185	Right-handed alpha
Helix 37	AE1	B	188	193	Right-handed alpha
Helix 38	AE2	B	205	213	Right-handed alpha
Helix 39	AE3	B	215	226	Right-handed alpha
Helix 40	AE4	B	252	259	Right-handed alpha
Helix 41	AE5	B	262	272	Right-handed alpha
Helix 42	AE6	B	288	297	Right-handed alpha
Helix 43	AE7	B	300	322	Right-handed alpha
Helix 44	AE8	B	326	330	Right-handed 310
Helix 45	AE9	B	337	346	Right-handed alpha
Helix 46	AF1	B	347	356	Right-handed alpha
Helix 47	AF2	B	396	404	Right-handed alpha
Helix 48	AF3	B	410	415	Right-handed alpha
Helix 49	AF4	B	417	430	Right-handed alpha
Helix 50	AF5	B	432	456	Right-handed alpha
Helix 51	AF6	B	470	499	Right-handed alpha
Helix 52	AF7	B	505	512	Right-handed alpha
Helix 53	AF8	B	512	534	Right-handed alpha
Helix 54	AF9	B	538	555	Right-handed alpha
Helix 55	AG1	B	556	558	Right-handed 310
Helix 56	AG2	B	561	573	Right-handed alpha
Helix 57	AG3	B	581	601	Right-handed alpha
Helix 58	AG4	B	631	645	Right-handed alpha
Helix 59	AG5	B	657	688	Right-handed alpha
Helix 60	AG6	B	690	714	Right-handed alpha
Helix 61	AG7	C	115	126	Right-handed alpha
Helix 62	AG8	C	129	132	Right-handed 310
Helix 63	AG9	C	133	141	Right-handed alpha
Helix 64	AH1	C	147	151	Right-handed 310
Helix 65	AH2	C	158	166	Right-handed alpha
Helix 66	AH3	C	167	171	Right-handed 310
Helix 67	AH4	C	173	185	Right-handed alpha
Helix 68	AH5	C	188	193	Right-handed alpha
Helix 69	AH6	C	205	213	Right-handed alpha
Helix 70	AH7	C	215	226	Right-handed alpha
Helix 71	AH8	C	252	259	Right-handed alpha
Helix 72	AH9	C	262	272	Right-handed alpha
Helix 73	AI1	C	288	297	Right-handed alpha
Helix 74	AI2	C	300	322	Right-handed alpha
Helix 75	AI3	C	326	330	Right-handed 310
Helix 76	AI4	C	337	346	Right-handed alpha
Helix 77	AI5	C	347	356	Right-handed alpha
Helix 78	AI6	C	396	404	Right-handed alpha
Helix 79	AI7	C	410	415	Right-handed alpha
Helix 80	AI8	C	417	430	Right-handed alpha
Helix 81	AI9	C	432	456	Right-handed alpha
Helix 82	AJ1	C	470	499	Right-handed alpha
Helix 83	AJ2	C	505	512	Right-handed alpha
Helix 84	AJ3	C	512	534	Right-handed alpha
Helix 85	AJ4	C	538	555	Right-handed alpha
Helix 86	AJ5	C	556	558	Right-handed 310
Helix 87	AJ6	C	561	573	Right-handed alpha
Helix 88	AJ7	C	581	601	Right-handed alpha
Helix 89	AJ8	C	631	645	Right-handed alpha
Helix 90	AJ9	C	657	688	Right-handed alpha
Helix 91	AK1	C	690	714	Right-handed alpha
Helix 92	AK2	D	115	126	Right-handed alpha
Helix 93	AK3	D	133	141	Right-handed alpha
Helix 94	AK4	D	147	151	Right-handed 310
Helix 95	AK5	D	158	166	Right-handed alpha
Helix 96	AK6	D	167	171	Right-handed 310
Helix 97	AK7	D	173	185	Right-handed alpha
Helix 98	AK8	D	188	193	Right-handed alpha
Helix 99	AK9	D	205	213	Right-handed alpha
Helix 100	AL1	D	215	226	Right-handed alpha
Helix 101	AL2	D	252	259	Right-handed alpha
Helix 102	AL3	D	262	272	Right-handed alpha
Helix 103	AL4	D	288	297	Right-handed alpha
Helix 104	AL5	D	300	322	Right-handed alpha
Helix 105	AL6	D	326	330	Right-handed 310
Helix 106	AL7	D	337	346	Right-handed alpha
Helix 107	AL8	D	347	356	Right-handed alpha
Helix 108	AL9	D	396	404	Right-handed alpha
Helix 109	AM1	D	410	415	Right-handed alpha
Helix 110	AM2	D	417	430	Right-handed alpha
Helix 111	AM3	D	432	456	Right-handed alpha
Helix 112	AM4	D	470	499	Right-handed alpha
Helix 113	AM5	D	505	512	Right-handed alpha
Helix 114	AM6	D	512	534	Right-handed alpha
Helix 115	AM7	D	538	555	Right-handed alpha
Helix 116	AM8	D	556	558	Right-handed 310
Helix 117	AM9	D	561	573	Right-handed alpha
Helix 118	AN1	D	581	601	Right-handed alpha
Helix 119	AN2	D	631	645	Right-handed alpha
Helix 120	AN3	D	657	688	Right-handed alpha
Helix 121	AN4	D	690	714	Right-handed alpha

There are 8 sheets in PDB entry 7LR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	372	first strand
Strand 2	A	379	385	anti-parallel
Strand 3	A	743	749	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	728	732	first strand
Strand 2	A	738	741	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	372	first strand
Strand 2	B	379	385	anti-parallel
Strand 3	B	743	749	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	728	732	first strand
Strand 2	B	738	741	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	371	372	first strand
Strand 2	C	379	385	anti-parallel
Strand 3	C	743	749	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	728	732	first strand
Strand 2	C	738	741	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	371	372	first strand
Strand 2	D	379	385	anti-parallel
Strand 3	D	743	749	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	732	first strand
Strand 2	D	738	741	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LR0