Analysis of interatomic Contacts of Structural Units in PDB entry:
7LT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LT5 entry

There are 3 chains in PDB entry 7LT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ILE 577
B
 ASP 2ILE 577
C
 ASP 7GLU 81
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 7LT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 19Right-handed alpha
Helix 2
AA2
A
20 28Right-handed alpha
Helix 3
AA3
A
33 46Right-handed alpha
Helix 4
AA4
A
66 83Right-handed alpha
Helix 5
AA5
A
83 91Right-handed alpha
Helix 6
AA6
A
97 99Right-handed 310
Helix 7
AA7
A
100 109Right-handed alpha
Helix 8
AA8
A
116 129Right-handed alpha
Helix 9
AA9
A
175 186Right-handed alpha
Helix 10
AB1
A
195 207Right-handed alpha
Helix 11
AB2
A
221 224Right-handed 310
Helix 12
AB3
A
228 239Right-handed alpha
Helix 13
AB4
A
286 290Right-handed 310
Helix 14
AB5
A
292 299Right-handed alpha
Helix 15
AB6
A
310 312Right-handed 310
Helix 16
AB7
A
320 334Right-handed alpha
Helix 17
AB8
A
338 341Right-handed alpha
Helix 18
AB9
A
352 356Right-handed alpha
Helix 19
AC1
A
362 367Right-handed 310
Helix 20
AC2
A
369 371Right-handed 310
Helix 21
AC3
A
378 382Right-handed 310
Helix 22
AC4
A
397 400Right-handed 310
Helix 23
AC5
A
406 413Right-handed alpha
Helix 24
AC6
A
414 416Right-handed 310
Helix 25
AC7
A
417 423Right-handed alpha
Helix 26
AC8
A
424 429Right-handed alpha
Helix 27
AC9
A
442 447Right-handed alpha
Helix 28
AD1
A
482 485Right-handed 310
Helix 29
AD2
A
489 498Right-handed alpha
Helix 30
AD3
A
499 510Right-handed alpha
Helix 31
AD4
A
521 526Right-handed alpha
Helix 32
AD5
A
535 552Right-handed alpha
Helix 33
AD6
A
557 576Right-handed alpha
Helix 34
AD7
B
9 18Right-handed alpha
Helix 35
AD8
B
20 28Right-handed alpha
Helix 36
AD9
B
33 45Right-handed alpha
Helix 37
AE1
B
66 82Right-handed alpha
Helix 38
AE2
B
83 91Right-handed alpha
Helix 39
AE3
B
97 99Right-handed 310
Helix 40
AE4
B
100 109Right-handed alpha
Helix 41
AE5
B
116 129Right-handed alpha
Helix 42
AE6
B
175 186Right-handed alpha
Helix 43
AE7
B
195 207Right-handed alpha
Helix 44
AE8
B
221 224Right-handed 310
Helix 45
AE9
B
228 239Right-handed alpha
Helix 46
AF1
B
286 290Right-handed 310
Helix 47
AF2
B
292 298Right-handed alpha
Helix 48
AF3
B
310 312Right-handed 310
Helix 49
AF4
B
320 334Right-handed alpha
Helix 50
AF5
B
338 341Right-handed alpha
Helix 51
AF6
B
352 356Right-handed alpha
Helix 52
AF7
B
362 368Right-handed 310
Helix 53
AF8
B
369 371Right-handed 310
Helix 54
AF9
B
378 382Right-handed 310
Helix 55
AG1
B
397 400Right-handed 310
Helix 56
AG2
B
406 413Right-handed alpha
Helix 57
AG3
B
414 416Right-handed 310
Helix 58
AG4
B
417 423Right-handed alpha
Helix 59
AG5
B
424 429Right-handed alpha
Helix 60
AG6
B
442 447Right-handed alpha
Helix 61
AG7
B
482 485Right-handed 310
Helix 62
AG8
B
489 498Right-handed alpha
Helix 63
AG9
B
499 510Right-handed alpha
Helix 64
AH1
B
521 526Right-handed alpha
Helix 65
AH2
B
535 551Right-handed alpha
Helix 66
AH3
B
556 576Right-handed alpha
Helix 67
AH4
C
9 19Right-handed alpha
Helix 68
AH5
C
20 28Right-handed alpha
Helix 69
AH6
C
33 45Right-handed alpha
Helix 70
AH7
C
66 83Right-handed alpha
Helix 71
AH8
C
83 91Right-handed alpha
Helix 72
AH9
C
97 99Right-handed 310
Helix 73
AI1
C
100 109Right-handed alpha
Helix 74
AI2
C
116 129Right-handed alpha
Helix 75
AI3
C
175 186Right-handed alpha
Helix 76
AI4
C
195 207Right-handed alpha
Helix 77
AI5
C
221 224Right-handed 310
Helix 78
AI6
C
225 227Right-handed 310
Helix 79
AI7
C
228 239Right-handed alpha
Helix 80
AI8
C
286 290Right-handed 310
Helix 81
AI9
C
292 298Right-handed alpha
Helix 82
AJ1
C
308 312Right-handed 310
Helix 83
AJ2
C
320 334Right-handed alpha
Helix 84
AJ3
C
338 341Right-handed alpha
Helix 85
AJ4
C
352 356Right-handed alpha
Helix 86
AJ5
C
362 368Right-handed 310
Helix 87
AJ6
C
378 382Right-handed 310
Helix 88
AJ7
C
397 400Right-handed 310
Helix 89
AJ8
C
406 413Right-handed alpha
Helix 90
AJ9
C
414 416Right-handed 310
Helix 91
AK1
C
417 423Right-handed alpha
Helix 92
AK2
C
424 429Right-handed alpha
Helix 93
AK3
C
442 447Right-handed alpha
Helix 94
AK4
C
482 485Right-handed 310
Helix 95
AK5
C
489 498Right-handed alpha
Helix 96
AK6
C
499 510Right-handed alpha
Helix 97
AK7
C
521 526Right-handed alpha
Helix 98
AK8
C
535 552Right-handed alpha
Helix 99
AK9
C
556 576Right-handed alpha
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There are 15 sheets in PDB entry 7LT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
110 114parallel
Strand 3
A
58 60parallel
Strand 4
A
159 164parallel
Strand 5
A
208 219parallel
Strand 6
A
260 266anti-parallel
Strand 7
A
240 246anti-parallel
Strand 8
A
274 280parallel
Strand 9
A
302 308anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
529 530anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 346first strand
Strand 2
A
475 480anti-parallel
Strand 3
A
450 454anti-parallel
Strand 4
A
463 465anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
373 377anti-parallel
Strand 4
A
470 471parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
517 519anti-parallel
Strand 3
A
511 514anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
110 114parallel
Strand 3
B
58 60parallel
Strand 4
B
159 164parallel
Strand 5
B
208 219parallel
Strand 6
B
260 266anti-parallel
Strand 7
B
240 246anti-parallel
Strand 8
B
274 280parallel
Strand 9
B
302 308anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 337first strand
Strand 2
B
529 530anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
342 346first strand
Strand 2
B
475 480anti-parallel
Strand 3
B
450 454anti-parallel
Strand 4
B
463 465anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
392 395anti-parallel
Strand 3
B
373 377anti-parallel
Strand 4
B
470 471parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 457first strand
Strand 2
B
517 519anti-parallel
Strand 3
B
511 514anti-parallel
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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 147first strand
Strand 2
C
110 114parallel
Strand 3
C
58 60parallel
Strand 4
C
159 164parallel
Strand 5
C
208 219parallel
Strand 6
C
260 266anti-parallel
Strand 7
C
240 246anti-parallel
Strand 8
C
275 280parallel
Strand 9
C
302 307anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
336 337first strand
Strand 2
C
529 530anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
342 346first strand
Strand 2
C
475 480anti-parallel
Strand 3
C
450 454anti-parallel
Strand 4
C
463 465anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
357 359first strand
Strand 2
C
392 395anti-parallel
Strand 3
C
373 377anti-parallel
Strand 4
C
469 471parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
456 457first strand
Strand 2
C
517 519anti-parallel
Strand 3
C
511 514anti-parallel
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