Analysis of interatomic Contacts of Structural Units in PDB entry:
7LV7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LV7 entry

There are 8 chains in PDB entry 7LV7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -1	LYS 186
A	CYS 188	VAL 355
B	SER 0	LYS 186
B	CYS 188	VAL 355
C	SER 0	LYS 186
C	CYS 188	VAL 355
D	GLY -1	LYS 186
D	CYS 188	ALA 216

There are 43 helices in PDB entry 7LV7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	8	Right-handed 310
Helix 2	AA2	A	9	13	Right-handed 310
Helix 3	AA3	A	50	55	Right-handed alpha
Helix 4	AA4	A	77	92	Right-handed alpha
Helix 5	AA5	A	98	113	Right-handed alpha
Helix 6	AA6	A	114	117	Right-handed 310
Helix 7	AA7	A	188	194	Right-handed alpha
Helix 8	AA8	A	195	205	Right-handed alpha
Helix 9	AA9	A	259	272	Right-handed alpha
Helix 10	AB1	A	283	290	Right-handed 310
Helix 11	AB2	A	325	340	Right-handed alpha
Helix 12	AB3	B	4	8	Right-handed 310
Helix 13	AB4	B	9	13	Right-handed 310
Helix 14	AB5	B	50	56	Right-handed alpha
Helix 15	AB6	B	77	92	Right-handed alpha
Helix 16	AB7	B	98	113	Right-handed alpha
Helix 17	AB8	B	114	117	Right-handed 310
Helix 18	AB9	B	188	205	Right-handed alpha
Helix 19	AC1	B	259	272	Right-handed alpha
Helix 20	AC2	B	283	290	Right-handed 310
Helix 21	AC3	B	325	340	Right-handed alpha
Helix 22	AC4	C	4	8	Right-handed 310
Helix 23	AC5	C	9	13	Right-handed 310
Helix 24	AC6	C	50	56	Right-handed alpha
Helix 25	AC7	C	77	92	Right-handed alpha
Helix 26	AC8	C	98	113	Right-handed alpha
Helix 27	AC9	C	114	117	Right-handed 310
Helix 28	AD1	C	188	194	Right-handed alpha
Helix 29	AD2	C	195	205	Right-handed alpha
Helix 30	AD3	C	259	272	Right-handed alpha
Helix 31	AD4	C	283	290	Right-handed 310
Helix 32	AD5	C	325	340	Right-handed alpha
Helix 33	AD6	D	4	8	Right-handed 310
Helix 34	AD7	D	9	13	Right-handed 310
Helix 35	AD8	D	50	56	Right-handed alpha
Helix 36	AD9	D	77	92	Right-handed alpha
Helix 37	AE1	D	98	113	Right-handed alpha
Helix 38	AE2	D	114	117	Right-handed 310
Helix 39	AE3	D	188	194	Right-handed alpha
Helix 40	AE4	D	195	205	Right-handed alpha
Helix 41	AE5	D	259	272	Right-handed alpha
Helix 42	AE6	D	283	290	Right-handed 310
Helix 43	AE7	D	325	340	Right-handed alpha

There are 18 sheets in PDB entry 7LV7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	23	29	anti-parallel
Strand 3	A	146	156	anti-parallel
Strand 4	A	125	134	anti-parallel
Strand 5	A	58	60	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	39	first strand
Strand 2	A	23	29	anti-parallel
Strand 3	A	146	156	anti-parallel
Strand 4	A	125	134	anti-parallel
Strand 5	A	63	67	anti-parallel
Strand 6	A	73	76	anti-parallel
Strand 7	A	350	352	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	47	first strand
Strand 2	B	43	47	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	224	first strand
Strand 2	A	209	213	anti-parallel
Strand 3	A	167	171	parallel
Strand 4	A	301	310	parallel
Strand 5	A	292	297	anti-parallel
Strand 6	A	228	237	anti-parallel
Strand 7	A	243	250	anti-parallel
Strand 8	A	276	279	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	224	first strand
Strand 2	A	209	213	anti-parallel
Strand 3	A	167	171	parallel
Strand 4	A	301	310	parallel
Strand 5	A	313	316	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	23	29	anti-parallel
Strand 3	B	147	156	anti-parallel
Strand 4	B	125	134	anti-parallel
Strand 5	B	58	60	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	39	first strand
Strand 2	B	23	29	anti-parallel
Strand 3	B	147	156	anti-parallel
Strand 4	B	125	134	anti-parallel
Strand 5	B	63	67	anti-parallel
Strand 6	B	73	76	anti-parallel
Strand 7	B	350	352	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	280	first strand
Strand 2	B	243	251	parallel
Strand 3	B	228	237	anti-parallel
Strand 4	B	221	224	anti-parallel
Strand 5	B	209	213	anti-parallel
Strand 6	B	167	171	parallel
Strand 7	B	301	310	parallel
Strand 8	B	313	316	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	280	first strand
Strand 2	B	243	251	parallel
Strand 3	B	228	237	anti-parallel
Strand 4	B	292	297	anti-parallel
Strand 5	B	301	310	anti-parallel
Strand 6	B	313	316	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	23	29	anti-parallel
Strand 3	C	147	156	anti-parallel
Strand 4	C	125	134	anti-parallel
Strand 5	C	58	60	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	23	29	anti-parallel
Strand 3	C	147	156	anti-parallel
Strand 4	C	125	134	anti-parallel
Strand 5	C	63	67	anti-parallel
Strand 6	C	73	76	anti-parallel
Strand 7	C	350	352	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	47	first strand
Strand 2	D	43	47	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	280	first strand
Strand 2	C	243	251	parallel
Strand 3	C	228	237	anti-parallel
Strand 4	C	221	224	anti-parallel
Strand 5	C	209	213	anti-parallel
Strand 6	C	167	171	parallel
Strand 7	C	301	310	parallel
Strand 8	C	313	316	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	280	first strand
Strand 2	C	243	251	parallel
Strand 3	C	228	237	anti-parallel
Strand 4	C	292	297	anti-parallel
Strand 5	C	301	310	anti-parallel
Strand 6	C	313	316	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	23	29	anti-parallel
Strand 3	D	147	156	anti-parallel
Strand 4	D	125	134	anti-parallel
Strand 5	D	58	60	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	39	first strand
Strand 2	D	23	29	anti-parallel
Strand 3	D	147	156	anti-parallel
Strand 4	D	125	134	anti-parallel
Strand 5	D	63	67	anti-parallel
Strand 6	D	73	76	anti-parallel
Strand 7	D	350	352	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	221	224	first strand
Strand 2	D	209	213	anti-parallel
Strand 3	D	167	171	parallel
Strand 4	D	301	310	parallel
Strand 5	D	292	297	anti-parallel
Strand 6	D	228	237	anti-parallel
Strand 7	D	243	251	anti-parallel
Strand 8	D	276	280	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	221	224	first strand
Strand 2	D	209	213	anti-parallel
Strand 3	D	167	171	parallel
Strand 4	D	301	310	parallel
Strand 5	D	313	316	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LV7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LV7