Analysis of interatomic Contacts of Structural Units in PDB entry:
7LV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LV9 entry

There are 8 chains in PDB entry 7LV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 16SER 112
A
 CYS 113GLY 214
D
 ASN 16LYS 104
C
 GLU 105GLY 198
F
 LEU 16SER 112
E
 CYS 113GLY 214
G
 G -34 T 60
H
 A -60 C 34
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 7LV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
28 40Right-handed alpha
Helix 2
AA2
B
48 74Right-handed alpha
Helix 3
AA3
B
80 89Right-handed alpha
Helix 4
AA4
B
90 92Right-handed 310
Helix 5
AA5
A
127 136Right-handed alpha
Helix 6
AA6
A
144 160Right-handed alpha
Helix 7
AA7
A
166 195Right-handed alpha
Helix 8
AA8
A
201 211Right-handed alpha
Helix 9
AA9
D
17 29Right-handed alpha
Helix 10
AB1
D
35 61Right-handed alpha
Helix 11
AB2
D
69 81Right-handed alpha
Helix 12
AB3
D
83 103Right-handed alpha
Helix 13
AB4
C
110 115Right-handed alpha
Helix 14
AB5
C
120 130Right-handed alpha
Helix 15
AB6
C
138 167Right-handed alpha
Helix 16
AB7
C
173 183Right-handed alpha
Helix 17
AB8
C
184 189Right-handed alpha
Helix 18
AB9
F
28 39Right-handed alpha
Helix 19
AC1
F
48 74Right-handed alpha
Helix 20
AC2
F
80 91Right-handed alpha
Helix 21
AC3
E
127 136Right-handed alpha
Helix 22
AC4
E
144 158Right-handed alpha
Helix 23
AC5
E
166 195Right-handed alpha
Helix 24
AC6
E
201 211Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 7LV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
A
199 200parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
A
164 165parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 34first strand
Strand 2
C
171 172parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 68first strand
Strand 2
C
136 137parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
78 79first strand
Strand 2
E
164 165parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il