Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LVO entry

There is 1 chain in PDB entry 7LVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 30LEU 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7LVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 57Right-handed alpha
Helix 2
AA2
A
71 78Right-handed alpha
Helix 3
AA3
A
94 105Right-handed alpha
Helix 4
AA4
A
113 119Right-handed alpha
Helix 5
AA5
A
120 127Right-handed alpha
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
A
145 156Right-handed alpha
Helix 8
AA8
A
170 180Right-handed alpha
Helix 9
AA9
A
206 219Right-handed alpha
Helix 10
AB1
A
223 227Right-handed 310
Helix 11
AB2
A
286 297Right-handed alpha
Helix 12
AB3
A
297 308Right-handed alpha
Helix 13
AB4
A
339 345Right-handed alpha
Helix 14
AB5
A
346 348Right-handed 310
Helix 15
AB6
A
353 363Right-handed alpha
Helix 16
AB7
A
365 369Right-handed 310
Helix 17
AB8
A
437 450Right-handed alpha
Helix 18
AB9
A
464 468Right-handed 310
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There are 7 sheets in PDB entry 7LVO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
62 69parallel
Strand 3
A
38 44parallel
Strand 4
A
108 111parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 167first strand
Strand 2
A
229 234anti-parallel
Strand 3
A
188 192anti-parallel
Strand 4
A
201 202anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
240 248anti-parallel
Strand 3
A
313 323anti-parallel
Strand 4
A
326 333anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
277 280anti-parallel
Strand 3
A
377 384anti-parallel
Strand 4
A
427 435anti-parallel
Strand 5
A
407 411anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 265first strand
Strand 2
A
269 272anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
452 453anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
421 423anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il