Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LVP entry

There is 1 chain in PDB entry 7LVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7LVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 61Right-handed alpha
Helix 2
AA2
A
63 80Right-handed alpha
Helix 3
AA3
A
100 117Right-handed alpha
Helix 4
AA4
A
150 152Right-handed 310
Helix 5
AA5
A
176 187Right-handed alpha
Helix 6
AA6
A
202 209Right-handed alpha
Helix 7
AA7
A
214 224Right-handed alpha
Helix 8
AA8
A
236 242Right-handed alpha
Helix 9
AA9
A
243 246Right-handed 310
Helix 10
AB1
A
264 274Right-handed alpha
Helix 11
AB2
A
277 282Right-handed alpha
Helix 12
AB3
A
296 298Right-handed 310
Helix 13
AB4
A
299 310Right-handed alpha
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There are 2 sheets in PDB entry 7LVP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 49first strand
Strand 2
A
140 148anti-parallel
Strand 3
A
84 89anti-parallel
Strand 4
A
119 120parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
289 295anti-parallel
Strand 3
A
163 168anti-parallel
Strand 4
A
314 321anti-parallel
Strand 5
A
253 257anti-parallel
Strand 6
A
326 329parallel
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