Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LVT entry

There are 4 chains in PDB entry 7LVT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 34	ILE 838
B	HIS 34	ILE 838
C	HIS 34	ILE 838
D	HIS 34	ILE 838

There are122 helices in PDB entry 7LVT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	88	102	Right-handed alpha
Helix 3	AA3	A	111	125	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	178	185	Right-handed alpha
Helix 6	AA6	A	185	195	Right-handed alpha
Helix 7	AA7	A	211	221	Right-handed alpha
Helix 8	AA8	A	231	245	Right-handed alpha
Helix 9	AA9	A	286	300	Right-handed alpha
Helix 10	AB1	A	317	337	Right-handed alpha
Helix 11	AB2	A	355	365	Right-handed alpha
Helix 12	AB3	A	454	457	Right-handed 310
Helix 13	AB4	A	461	474	Right-handed alpha
Helix 14	AB5	A	498	506	Right-handed alpha
Helix 15	AB6	A	519	524	Right-handed alpha
Helix 16	AB7	A	551	556	Right-handed alpha
Helix 17	AB8	A	562	575	Right-handed alpha
Helix 18	AB9	A	575	581	Right-handed alpha
Helix 19	AC1	A	629	661	Right-handed alpha
Helix 20	AC2	A	670	675	Right-handed alpha
Helix 21	AC3	A	687	696	Right-handed alpha
Helix 22	AC4	A	698	711	Right-handed alpha
Helix 23	AC5	A	711	716	Right-handed alpha
Helix 24	AC6	A	719	730	Right-handed alpha
Helix 25	AC7	A	738	746	Right-handed alpha
Helix 26	AC8	A	772	787	Right-handed alpha
Helix 27	AC9	A	788	799	Right-handed alpha
Helix 28	AD1	A	819	826	Right-handed alpha
Helix 29	AD2	A	826	833	Right-handed alpha
Helix 30	AD3	A	834	838	Right-handed 310
Helix 31	AD4	B	51	67	Right-handed alpha
Helix 32	AD5	B	87	102	Right-handed alpha
Helix 33	AD6	B	111	125	Right-handed alpha
Helix 34	AD7	B	152	168	Right-handed alpha
Helix 35	AD8	B	178	185	Right-handed alpha
Helix 36	AD9	B	185	191	Right-handed alpha
Helix 37	AE1	B	192	194	Right-handed 310
Helix 38	AE2	B	211	221	Right-handed alpha
Helix 39	AE3	B	231	245	Right-handed alpha
Helix 40	AE4	B	266	271	Right-handed alpha
Helix 41	AE5	B	286	303	Right-handed alpha
Helix 42	AE6	B	317	337	Right-handed alpha
Helix 43	AE7	B	355	365	Right-handed alpha
Helix 44	AE8	B	454	457	Right-handed 310
Helix 45	AE9	B	461	474	Right-handed alpha
Helix 46	AF1	B	498	506	Right-handed alpha
Helix 47	AF2	B	519	524	Right-handed alpha
Helix 48	AF3	B	550	554	Right-handed 310
Helix 49	AF4	B	559	581	Right-handed alpha
Helix 50	AF5	B	629	664	Right-handed alpha
Helix 51	AF6	B	670	675	Right-handed alpha
Helix 52	AF7	B	687	696	Right-handed alpha
Helix 53	AF8	B	698	711	Right-handed alpha
Helix 54	AF9	B	711	716	Right-handed alpha
Helix 55	AG1	B	719	730	Right-handed alpha
Helix 56	AG2	B	738	746	Right-handed alpha
Helix 57	AG3	B	772	787	Right-handed alpha
Helix 58	AG4	B	788	799	Right-handed alpha
Helix 59	AG5	B	817	821	Right-handed 310
Helix 60	AG6	B	822	835	Right-handed alpha
Helix 61	AG7	C	51	67	Right-handed alpha
Helix 62	AG8	C	87	102	Right-handed alpha
Helix 63	AG9	C	111	126	Right-handed alpha
Helix 64	AH1	C	152	168	Right-handed alpha
Helix 65	AH2	C	178	191	Right-handed alpha
Helix 66	AH3	C	192	194	Right-handed 310
Helix 67	AH4	C	211	221	Right-handed alpha
Helix 68	AH5	C	231	245	Right-handed alpha
Helix 69	AH6	C	266	271	Right-handed alpha
Helix 70	AH7	C	286	300	Right-handed alpha
Helix 71	AH8	C	317	337	Right-handed alpha
Helix 72	AH9	C	355	365	Right-handed alpha
Helix 73	AI1	C	454	457	Right-handed 310
Helix 74	AI2	C	461	474	Right-handed alpha
Helix 75	AI3	C	498	506	Right-handed alpha
Helix 76	AI4	C	519	524	Right-handed alpha
Helix 77	AI5	C	551	556	Right-handed alpha
Helix 78	AI6	C	562	575	Right-handed alpha
Helix 79	AI7	C	575	582	Right-handed alpha
Helix 80	AI8	C	629	661	Right-handed alpha
Helix 81	AI9	C	670	675	Right-handed alpha
Helix 82	AJ1	C	687	696	Right-handed alpha
Helix 83	AJ2	C	698	711	Right-handed alpha
Helix 84	AJ3	C	711	716	Right-handed alpha
Helix 85	AJ4	C	719	730	Right-handed alpha
Helix 86	AJ5	C	738	746	Right-handed alpha
Helix 87	AJ6	C	772	787	Right-handed alpha
Helix 88	AJ7	C	788	799	Right-handed alpha
Helix 89	AJ8	C	819	826	Right-handed alpha
Helix 90	AJ9	C	826	833	Right-handed alpha
Helix 91	AK1	C	834	838	Right-handed 310
Helix 92	AK2	D	51	67	Right-handed alpha
Helix 93	AK3	D	87	102	Right-handed alpha
Helix 94	AK4	D	111	126	Right-handed alpha
Helix 95	AK5	D	152	168	Right-handed alpha
Helix 96	AK6	D	178	185	Right-handed alpha
Helix 97	AK7	D	185	191	Right-handed alpha
Helix 98	AK8	D	192	194	Right-handed 310
Helix 99	AK9	D	211	221	Right-handed alpha
Helix 100	AL1	D	231	246	Right-handed alpha
Helix 101	AL2	D	260	264	Right-handed 310
Helix 102	AL3	D	266	271	Right-handed alpha
Helix 103	AL4	D	286	303	Right-handed alpha
Helix 104	AL5	D	317	337	Right-handed alpha
Helix 105	AL6	D	355	365	Right-handed alpha
Helix 106	AL7	D	454	457	Right-handed 310
Helix 107	AL8	D	461	474	Right-handed alpha
Helix 108	AL9	D	498	506	Right-handed alpha
Helix 109	AM1	D	519	524	Right-handed alpha
Helix 110	AM2	D	550	554	Right-handed 310
Helix 111	AM3	D	559	581	Right-handed alpha
Helix 112	AM4	D	629	664	Right-handed alpha
Helix 113	AM5	D	670	675	Right-handed alpha
Helix 114	AM6	D	687	696	Right-handed alpha
Helix 115	AM7	D	698	711	Right-handed alpha
Helix 116	AM8	D	711	716	Right-handed alpha
Helix 117	AM9	D	719	730	Right-handed alpha
Helix 118	AN1	D	738	746	Right-handed alpha
Helix 119	AN2	D	772	787	Right-handed alpha
Helix 120	AN3	D	788	799	Right-handed alpha
Helix 121	AN4	D	817	821	Right-handed 310
Helix 122	AN5	D	822	835	Right-handed alpha

There are 37 sheets in PDB entry 7LVT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	80	first strand
Strand 2	A	35	40	parallel
Strand 3	A	105	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	151	parallel
Strand 6	A	383	384	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	201	first strand
Strand 2	A	171	174	parallel
Strand 3	A	225	228	parallel
Strand 4	A	253	259	parallel
Strand 5	A	275	280	parallel
Strand 6	A	390	395	anti-parallel
Strand 7	A	398	405	anti-parallel
Strand 8	A	411	413	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	373	375	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	482	first strand
Strand 2	A	433	437	parallel
Strand 3	A	511	512	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	528	first strand
Strand 2	A	766	768	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	533	535	first strand
Strand 2	A	761	763	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	680	682	first strand
Strand 2	A	732	737	parallel
Strand 3	A	537	541	anti-parallel
Strand 4	A	752	754	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	83	first strand
Strand 2	B	35	43	parallel
Strand 3	B	106	107	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	131	first strand
Strand 2	B	146	151	parallel
Strand 3	B	383	384	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	203	first strand
Strand 2	B	171	176	parallel
Strand 3	B	225	228	parallel
Strand 4	B	253	256	parallel
Strand 5	B	275	280	parallel
Strand 6	B	388	395	anti-parallel
Strand 7	B	398	401	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	203	first strand
Strand 2	B	171	176	parallel
Strand 3	B	225	228	parallel
Strand 4	B	253	256	parallel
Strand 5	B	275	280	parallel
Strand 6	B	388	395	anti-parallel
Strand 7	B	405	406	anti-parallel
Strand 8	B	410	411	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	373	375	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	482	first strand
Strand 2	B	433	437	parallel
Strand 3	B	511	512	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	526	528	first strand
Strand 2	B	766	768	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	535	first strand
Strand 2	B	761	763	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	680	682	first strand
Strand 2	B	732	737	parallel
Strand 3	B	537	541	anti-parallel
Strand 4	B	752	754	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	83	first strand
Strand 2	C	36	43	parallel
Strand 3	C	106	107	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	131	first strand
Strand 2	C	146	148	parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	203	first strand
Strand 2	C	172	176	parallel
Strand 3	C	225	228	parallel
Strand 4	C	253	256	parallel
Strand 5	C	275	280	parallel
Strand 6	C	388	395	anti-parallel
Strand 7	C	398	406	anti-parallel
Strand 8	C	411	413	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	478	482	first strand
Strand 2	C	433	437	parallel
Strand 3	C	511	512	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	526	528	first strand
Strand 2	C	766	768	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	533	535	first strand
Strand 2	C	761	763	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	680	682	first strand
Strand 2	C	732	737	parallel
Strand 3	C	537	541	anti-parallel
Strand 4	C	752	754	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	83	first strand
Strand 2	D	35	43	parallel
Strand 3	D	106	107	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	131	first strand
Strand 2	D	146	151	parallel
Strand 3	D	383	384	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	203	first strand
Strand 2	D	171	176	parallel
Strand 3	D	225	228	parallel
Strand 4	D	253	256	parallel
Strand 5	D	275	277	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	375	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	388	395	first strand
Strand 2	D	398	406	anti-parallel
Strand 3	D	410	413	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	478	482	first strand
Strand 2	D	433	437	parallel
Strand 3	D	511	512	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	528	first strand
Strand 2	D	766	768	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	533	535	first strand
Strand 2	D	761	763	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	680	682	first strand
Strand 2	D	732	737	parallel
Strand 3	D	537	541	anti-parallel
Strand 4	D	752	754	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LVT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVT