Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LVV entry

There are 8 chains in PDB entry 7LVV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	MET 1029
B	SER 2	MET 1029
C	SER 2	PRO 144
D	SER 2	VAL 147
E	C 1	C 28
F	G 2	G 28
G	C 1	C 28
H	G 2	G 28

There are103 helices in PDB entry 7LVV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	20	Right-handed alpha
Helix 2	AA2	A	24	29	Right-handed alpha
Helix 3	AA3	A	29	44	Right-handed alpha
Helix 4	AA4	A	86	97	Right-handed alpha
Helix 5	AA5	A	130	141	Right-handed alpha
Helix 6	AA6	A	146	158	Right-handed alpha
Helix 7	AA7	A	160	175	Right-handed alpha
Helix 8	AA8	A	180	192	Right-handed alpha
Helix 9	AA9	A	201	222	Right-handed alpha
Helix 10	AB1	A	226	232	Right-handed alpha
Helix 11	AB2	A	232	243	Right-handed alpha
Helix 12	AB3	A	247	258	Right-handed alpha
Helix 13	AB4	A	258	263	Right-handed alpha
Helix 14	AB5	A	264	268	Right-handed 310
Helix 15	AB6	A	274	292	Right-handed alpha
Helix 16	AB7	A	294	301	Right-handed alpha
Helix 17	AB8	A	307	323	Right-handed alpha
Helix 18	AB9	A	345	355	Right-handed alpha
Helix 19	AC1	A	359	367	Right-handed alpha
Helix 20	AC2	A	374	393	Right-handed alpha
Helix 21	AC3	A	427	440	Right-handed alpha
Helix 22	AC4	A	467	477	Right-handed alpha
Helix 23	AC5	A	477	482	Right-handed alpha
Helix 24	AC6	A	491	504	Right-handed alpha
Helix 25	AC7	A	524	532	Right-handed alpha
Helix 26	AC8	A	551	558	Right-handed alpha
Helix 27	AC9	A	600	605	Right-handed alpha
Helix 28	AD1	A	612	616	Right-handed 310
Helix 29	AD2	A	646	651	Right-handed alpha
Helix 30	AD3	A	674	678	Right-handed 310
Helix 31	AD4	A	682	703	Right-handed alpha
Helix 32	AD5	A	704	710	Right-handed alpha
Helix 33	AD6	A	720	729	Right-handed alpha
Helix 34	AD7	A	765	770	Right-handed alpha
Helix 35	AD8	A	827	838	Right-handed alpha
Helix 36	AD9	A	844	858	Right-handed alpha
Helix 37	AE1	A	858	865	Right-handed alpha
Helix 38	AE2	A	865	870	Right-handed alpha
Helix 39	AE3	A	882	898	Right-handed alpha
Helix 40	AE4	A	918	925	Right-handed alpha
Helix 41	AE5	A	956	960	Right-handed 310
Helix 42	AE6	A	968	976	Right-handed alpha
Helix 43	AE7	A	985	991	Right-handed alpha
Helix 44	AE8	A	1000	1024	Right-handed alpha
Helix 45	AE9	B	3	19	Right-handed alpha
Helix 46	AF1	B	24	29	Right-handed alpha
Helix 47	AF2	B	29	44	Right-handed alpha
Helix 48	AF3	B	55	59	Right-handed 310
Helix 49	AF4	B	86	97	Right-handed alpha
Helix 50	AF5	B	128	141	Right-handed alpha
Helix 51	AF6	B	144	176	Right-handed alpha
Helix 52	AF7	B	178	197	Right-handed alpha
Helix 53	AF8	B	201	220	Right-handed alpha
Helix 54	AF9	B	227	231	Right-handed 310
Helix 55	AG1	B	232	238	Right-handed alpha
Helix 56	AG2	B	238	244	Right-handed alpha
Helix 57	AG3	B	247	271	Right-handed alpha
Helix 58	AG4	B	274	292	Right-handed alpha
Helix 59	AG5	B	296	301	Right-handed alpha
Helix 60	AG6	B	307	326	Right-handed alpha
Helix 61	AG7	B	345	355	Right-handed alpha
Helix 62	AG8	B	356	367	Right-handed alpha
Helix 63	AG9	B	374	387	Right-handed alpha
Helix 64	AH1	B	388	393	Right-handed alpha
Helix 65	AH2	B	427	439	Right-handed alpha
Helix 66	AH3	B	457	461	Right-handed 310
Helix 67	AH4	B	468	477	Right-handed alpha
Helix 68	AH5	B	477	482	Right-handed alpha
Helix 69	AH6	B	491	504	Right-handed alpha
Helix 70	AH7	B	521	525	Right-handed 310
Helix 71	AH8	B	526	531	Right-handed alpha
Helix 72	AH9	B	532	534	Right-handed 310
Helix 73	AI1	B	550	558	Right-handed alpha
Helix 74	AI2	B	600	611	Right-handed alpha
Helix 75	AI3	B	612	616	Right-handed 310
Helix 76	AI4	B	646	652	Right-handed alpha
Helix 77	AI5	B	674	677	Right-handed 310
Helix 78	AI6	B	684	702	Right-handed alpha
Helix 79	AI7	B	704	710	Right-handed alpha
Helix 80	AI8	B	720	726	Right-handed alpha
Helix 81	AI9	B	765	769	Right-handed 310
Helix 82	AJ1	B	770	774	Right-handed 310
Helix 83	AJ2	B	802	805	Right-handed 310
Helix 84	AJ3	B	827	838	Right-handed alpha
Helix 85	AJ4	B	844	856	Right-handed alpha
Helix 86	AJ5	B	860	865	Right-handed alpha
Helix 87	AJ6	B	865	870	Right-handed alpha
Helix 88	AJ7	B	881	898	Right-handed alpha
Helix 89	AJ8	B	918	924	Right-handed alpha
Helix 90	AJ9	B	968	977	Right-handed alpha
Helix 91	AK1	B	984	989	Right-handed alpha
Helix 92	AK2	B	995	998	Right-handed 310
Helix 93	AK3	B	999	1024	Right-handed alpha
Helix 94	AK4	C	3	20	Right-handed alpha
Helix 95	AK5	C	24	43	Right-handed alpha
Helix 96	AK6	C	86	96	Right-handed alpha
Helix 97	AK7	C	128	142	Right-handed alpha
Helix 98	AK8	D	5	10	Right-handed alpha
Helix 99	AK9	D	10	20	Right-handed alpha
Helix 100	AL1	D	24	29	Right-handed alpha
Helix 101	AL2	D	29	44	Right-handed alpha
Helix 102	AL3	D	86	98	Right-handed alpha
Helix 103	AL4	D	128	142	Right-handed alpha

There are 18 sheets in PDB entry 7LVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	65	68	anti-parallel
Strand 3	A	74	80	anti-parallel
Strand 4	A	104	107	parallel
Strand 5	A	112	115	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	338	first strand
Strand 2	A	442	447	parallel
Strand 3	A	510	515	parallel
Strand 4	A	570	576	anti-parallel
Strand 5	A	537	542	anti-parallel
Strand 6	A	590	592	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	667	668	first strand
Strand 2	A	809	811	anti-parallel
Strand 3	A	779	782	anti-parallel
Strand 4	A	794	796	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	740	744	first strand
Strand 2	A	750	754	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	908	909	first strand
Strand 2	A	951	953	anti-parallel
Strand 3	A	940	945	anti-parallel
Strand 4	A	931	934	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	65	68	anti-parallel
Strand 3	B	76	80	anti-parallel
Strand 4	B	103	107	parallel
Strand 5	B	112	116	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	336	339	parallel
Strand 3	B	442	445	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	514	first strand
Strand 2	B	570	577	anti-parallel
Strand 3	B	537	543	anti-parallel
Strand 4	B	589	594	parallel
Strand 5	B	619	620	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	667	668	first strand
Strand 2	B	809	811	anti-parallel
Strand 3	B	779	782	anti-parallel
Strand 4	B	793	796	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	679	680	first strand
Strand 2	B	750	754	anti-parallel
Strand 3	B	740	744	anti-parallel
Strand 4	B	799	800	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	814	816	first strand
Strand 2	B	822	824	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	908	911	first strand
Strand 2	B	950	953	anti-parallel
Strand 3	B	943	947	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	49	first strand
Strand 2	C	65	66	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	60	61	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	73	74	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	80	first strand
Strand 2	C	103	107	parallel
Strand 3	C	111	116	anti-parallel
Strand 4	C	119	125	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	66	67	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	79	first strand
Strand 2	D	104	107	parallel
Strand 3	D	112	116	anti-parallel
Strand 4	D	119	124	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LVV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LVV