Analysis of interatomic Contacts of Structural Units in PDB entry:
7LW2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LW2 entry

There are 6 chains in PDB entry 7LW2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	GLY 1	THR 142
A	GLY 1	THR 142
B	GLY 1	THR 142
C	GLY 1	ASP 141
D	GLY 1	THR 142
F	GLY 1	THR 142

There are 19 helices in PDB entry 7LW2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	21	27	Right-handed alpha
Helix 2	AA2	E	103	107	Right-handed 310
Helix 3	AA3	E	135	141	Right-handed 310
Helix 4	AA4	A	21	28	Right-handed alpha
Helix 5	AA5	A	103	107	Right-handed 310
Helix 6	AA6	A	135	141	Right-handed 310
Helix 7	AA7	B	16	20	Right-handed 310
Helix 8	AA8	B	21	27	Right-handed alpha
Helix 9	AA9	B	103	107	Right-handed 310
Helix 10	AB1	B	135	142	Right-handed 310
Helix 11	AB2	C	21	28	Right-handed alpha
Helix 12	AB3	C	103	107	Right-handed 310
Helix 13	AB4	C	135	141	Right-handed 310
Helix 14	AB5	D	21	27	Right-handed alpha
Helix 15	AB6	D	103	107	Right-handed 310
Helix 16	AB7	D	135	142	Right-handed 310
Helix 17	AB8	F	21	26	Right-handed alpha
Helix 18	AB9	F	103	107	Right-handed 310
Helix 19	AC1	F	135	141	Right-handed 310

There are 11 sheets in PDB entry 7LW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	15	first strand
Strand 2	A	37	47	anti-parallel
Strand 3	A	30	32	anti-parallel
Strand 4	E	30	32	anti-parallel
Strand 5	E	37	47	anti-parallel
Strand 6	E	7	15	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	72	first strand
Strand 2	E	57	62	anti-parallel
Strand 3	E	110	113	anti-parallel
Strand 4	E	116	125	anti-parallel
Strand 5	E	128	133	anti-parallel
Strand 6	E	95	99	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	62	first strand
Strand 2	A	67	77	anti-parallel
Strand 3	A	95	99	anti-parallel
Strand 4	A	128	133	anti-parallel
Strand 5	A	116	125	anti-parallel
Strand 6	A	110	113	anti-parallel
Strand 7	A	57	62	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	15	first strand
Strand 2	D	37	47	anti-parallel
Strand 3	D	30	32	anti-parallel
Strand 4	B	30	32	anti-parallel
Strand 5	B	37	47	anti-parallel
Strand 6	B	7	15	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	72	first strand
Strand 2	B	57	62	anti-parallel
Strand 3	B	110	113	anti-parallel
Strand 4	B	116	124	anti-parallel
Strand 5	B	129	133	anti-parallel
Strand 6	B	95	98	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	15	first strand
Strand 2	F	37	47	anti-parallel
Strand 3	F	30	32	anti-parallel
Strand 4	C	30	32	anti-parallel
Strand 5	C	37	47	anti-parallel
Strand 6	C	7	15	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	72	first strand
Strand 2	C	57	62	anti-parallel
Strand 3	C	110	113	anti-parallel
Strand 4	C	116	125	anti-parallel
Strand 5	C	128	133	anti-parallel
Strand 6	C	95	99	anti-parallel
Strand 7	C	74	77	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	90	91	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	72	first strand
Strand 2	D	57	62	anti-parallel
Strand 3	D	110	113	anti-parallel
Strand 4	D	116	125	anti-parallel
Strand 5	D	128	133	anti-parallel
Strand 6	D	95	99	anti-parallel
Strand 7	D	74	77	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	90	91	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	67	71	first strand
Strand 2	F	58	62	anti-parallel
Strand 3	F	110	113	anti-parallel
Strand 4	F	116	125	anti-parallel
Strand 5	F	128	133	anti-parallel
Strand 6	F	95	99	anti-parallel
Strand 7	F	74	77	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LW2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LW2