Analysis of interatomic Contacts of Structural Units in PDB entry:
7LX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LX5 entry

There are 3 chains in PDB entry 7LX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 333LYS 528
C
 VAL 2SER 130
A
 GLN 1SER 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7LX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
338 343Right-handed alpha
Helix 2
AA2
B
365 370Right-handed alpha
Helix 3
AA3
B
383 390Right-handed alpha
Helix 4
AA4
B
405 410Right-handed 310
Helix 5
AA5
B
416 422Right-handed alpha
Helix 6
AA6
B
438 443Right-handed alpha
Helix 7
AA7
B
502 505Right-handed 310
Helix 8
AA8
C
87 91Right-handed 310
Helix 9
AA9
C
113 117Right-handed 310
Helix 10
AB1
A
28 32Right-handed 310
Helix 11
AB2
A
86 90Right-handed 310
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There are 9 sheets in PDB entry 7LX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 358first strand
Strand 2
B
394 403anti-parallel
Strand 3
B
507 516anti-parallel
Strand 4
B
431 437anti-parallel
Strand 5
B
374 380anti-parallel
Strand 6
A
108 113anti-parallel
Strand 7
A
91 98anti-parallel
Strand 8
A
117 121anti-parallel
Strand 9
A
10 12parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 358first strand
Strand 2
B
394 403anti-parallel
Strand 3
B
507 516anti-parallel
Strand 4
B
431 437anti-parallel
Strand 5
B
374 380anti-parallel
Strand 6
A
108 113anti-parallel
Strand 7
A
91 98anti-parallel
Strand 8
A
34 39anti-parallel
Strand 9
A
46 51anti-parallel
Strand 10
A
57 59anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 454first strand
Strand 2
B
492 494anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 474first strand
Strand 2
B
488 489anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 72anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 60first strand
Strand 2
C
45 52anti-parallel
Strand 3
C
32 39anti-parallel
Strand 4
C
92 100anti-parallel
Strand 5
C
119 120anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 60first strand
Strand 2
C
45 52anti-parallel
Strand 3
C
32 39anti-parallel
Strand 4
C
92 100anti-parallel
Strand 5
C
124 126anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 104first strand
Strand 2
C
107 109anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
67 71anti-parallel
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