Analysis of interatomic Contacts of Structural Units in PDB entry:
7LY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LY6 entry

There is 1 chain in PDB entry 7LY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ASP 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7LY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
37 45Right-handed alpha
Helix 3
AA3
A
49 57Right-handed alpha
Helix 4
AA4
A
60 74Right-handed alpha
Helix 5
AA5
A
83 89Right-handed alpha
Helix 6
AA6
A
90 95Right-handed 310
Helix 7
AA7
A
100 104Right-handed 310
Helix 8
AA8
A
106 119Right-handed alpha
Helix 9
AA9
A
139 144Right-handed alpha
Helix 10
AB1
A
158 167Right-handed alpha
Helix 11
AB2
A
183 187Right-handed 310
Helix 12
AB3
A
228 232Right-handed 310
Helix 13
AB4
A
233 235Right-handed 310
Helix 14
AB5
A
236 243Right-handed alpha
Helix 15
AB6
A
256 261Right-handed alpha
Helix 16
AB7
A
261 286Right-handed alpha
Helix 17
AB8
A
297 305Right-handed alpha
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There are 4 sheets in PDB entry 7LY6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
5 8anti-parallel
Strand 3
A
77 78anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
21 23anti-parallel
Strand 3
A
26 28anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
177 178anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 222first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
190 196anti-parallel
Strand 4
A
245 252anti-parallel
Strand 5
A
311 321anti-parallel
Strand 6
A
288 293anti-parallel
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