Analysis of interatomic Contacts of Structural Units in PDB entry:
7LZ4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LZ4 entry

There are 8 chains in PDB entry 7LZ4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 109	SER 376
B	ALA 109	SER 376
C	ALA 109	SER 376
D	ALA 108	SER 373
E	ALA 109	SER 376
F	ALA 109	SER 376
G	ALA 109	SER 376
H	ALA 109	SER 376

There are 86 helices in PDB entry 7LZ4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	119	132	Right-handed alpha
Helix 2	AA2	A	133	138	Right-handed 310
Helix 3	AA3	A	140	151	Right-handed alpha
Helix 4	AA4	A	200	205	Right-handed alpha
Helix 5	AA5	A	226	245	Right-handed alpha
Helix 6	AA6	A	252	256	Right-handed 310
Helix 7	AA7	A	258	269	Right-handed alpha
Helix 8	AA8	A	323	329	Right-handed alpha
Helix 9	AA9	A	350	357	Right-handed alpha
Helix 10	AB1	A	360	367	Right-handed alpha
Helix 11	AB2	B	119	133	Right-handed alpha
Helix 12	AB3	B	134	138	Right-handed 310
Helix 13	AB4	B	140	151	Right-handed alpha
Helix 14	AB5	B	200	205	Right-handed alpha
Helix 15	AB6	B	226	250	Right-handed alpha
Helix 16	AB7	B	253	257	Right-handed 310
Helix 17	AB8	B	258	269	Right-handed alpha
Helix 18	AB9	B	323	330	Right-handed alpha
Helix 19	AC1	B	350	357	Right-handed alpha
Helix 20	AC2	B	360	367	Right-handed alpha
Helix 21	AC3	C	119	132	Right-handed alpha
Helix 22	AC4	C	133	138	Right-handed 310
Helix 23	AC5	C	140	151	Right-handed alpha
Helix 24	AC6	C	200	205	Right-handed alpha
Helix 25	AC7	C	226	250	Right-handed alpha
Helix 26	AC8	C	252	257	Right-handed 310
Helix 27	AC9	C	258	269	Right-handed alpha
Helix 28	AD1	C	323	330	Right-handed alpha
Helix 29	AD2	C	350	357	Right-handed alpha
Helix 30	AD3	C	360	367	Right-handed alpha
Helix 31	AD4	D	119	133	Right-handed alpha
Helix 32	AD5	D	134	138	Right-handed 310
Helix 33	AD6	D	140	151	Right-handed alpha
Helix 34	AD7	D	200	205	Right-handed alpha
Helix 35	AD8	D	226	233	Right-handed alpha
Helix 36	AD9	D	233	246	Right-handed alpha
Helix 37	AE1	D	247	249	Right-handed 310
Helix 38	AE2	D	252	256	Right-handed 310
Helix 39	AE3	D	258	269	Right-handed alpha
Helix 40	AE4	D	325	330	Right-handed alpha
Helix 41	AE5	D	350	357	Right-handed alpha
Helix 42	AE6	D	360	367	Right-handed alpha
Helix 43	AE7	E	119	133	Right-handed alpha
Helix 44	AE8	E	134	137	Right-handed 310
Helix 45	AE9	E	140	151	Right-handed alpha
Helix 46	AF1	E	200	205	Right-handed alpha
Helix 47	AF2	E	226	250	Right-handed alpha
Helix 48	AF3	E	252	256	Right-handed 310
Helix 49	AF4	E	258	269	Right-handed alpha
Helix 50	AF5	E	323	329	Right-handed alpha
Helix 51	AF6	E	350	357	Right-handed alpha
Helix 52	AF7	E	360	370	Right-handed alpha
Helix 53	AF8	F	119	132	Right-handed alpha
Helix 54	AF9	F	133	137	Right-handed 310
Helix 55	AG1	F	140	151	Right-handed alpha
Helix 56	AG2	F	200	205	Right-handed alpha
Helix 57	AG3	F	226	233	Right-handed alpha
Helix 58	AG4	F	233	245	Right-handed alpha
Helix 59	AG5	F	246	249	Right-handed 310
Helix 60	AG6	F	252	256	Right-handed 310
Helix 61	AG7	F	258	269	Right-handed alpha
Helix 62	AG8	F	323	329	Right-handed alpha
Helix 63	AG9	F	350	357	Right-handed alpha
Helix 64	AH1	F	360	367	Right-handed alpha
Helix 65	AH2	G	119	133	Right-handed alpha
Helix 66	AH3	G	134	138	Right-handed 310
Helix 67	AH4	G	140	151	Right-handed alpha
Helix 68	AH5	G	200	205	Right-handed alpha
Helix 69	AH6	G	226	250	Right-handed alpha
Helix 70	AH7	G	252	256	Right-handed 310
Helix 71	AH8	G	258	269	Right-handed alpha
Helix 72	AH9	G	323	329	Right-handed alpha
Helix 73	AI1	G	350	357	Right-handed alpha
Helix 74	AI2	G	360	367	Right-handed alpha
Helix 75	AI3	H	119	132	Right-handed alpha
Helix 76	AI4	H	133	138	Right-handed 310
Helix 77	AI5	H	140	151	Right-handed alpha
Helix 78	AI6	H	200	205	Right-handed alpha
Helix 79	AI7	H	226	233	Right-handed alpha
Helix 80	AI8	H	233	245	Right-handed alpha
Helix 81	AI9	H	246	249	Right-handed 310
Helix 82	AJ1	H	252	257	Right-handed 310
Helix 83	AJ2	H	258	269	Right-handed alpha
Helix 84	AJ3	H	323	329	Right-handed alpha
Helix 85	AJ4	H	350	357	Right-handed alpha
Helix 86	AJ5	H	360	370	Right-handed alpha

There are 32 sheets in PDB entry 7LZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	156	first strand
Strand 2	A	219	225	anti-parallel
Strand 3	A	171	177	anti-parallel
Strand 4	A	197	198	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	A	212	215	anti-parallel
Strand 3	A	180	184	anti-parallel
Strand 4	A	187	192	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	274	first strand
Strand 2	A	336	349	anti-parallel
Strand 3	A	289	302	anti-parallel
Strand 4	A	311	316	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	281	first strand
Strand 2	A	336	349	anti-parallel
Strand 3	A	289	302	anti-parallel
Strand 4	A	321	322	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	156	first strand
Strand 2	B	219	225	anti-parallel
Strand 3	B	171	177	anti-parallel
Strand 4	B	197	198	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	212	215	anti-parallel
Strand 3	B	180	184	anti-parallel
Strand 4	B	187	192	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	274	first strand
Strand 2	B	336	349	anti-parallel
Strand 3	B	289	301	anti-parallel
Strand 4	B	315	316	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	274	first strand
Strand 2	B	336	349	anti-parallel
Strand 3	B	289	301	anti-parallel
Strand 4	B	321	322	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	156	first strand
Strand 2	C	219	225	anti-parallel
Strand 3	C	171	177	anti-parallel
Strand 4	C	197	198	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	212	215	anti-parallel
Strand 3	C	180	184	anti-parallel
Strand 4	C	187	192	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	272	first strand
Strand 2	C	338	349	anti-parallel
Strand 3	C	289	299	anti-parallel
Strand 4	C	315	316	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	272	first strand
Strand 2	C	338	349	anti-parallel
Strand 3	C	289	299	anti-parallel
Strand 4	C	321	322	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	156	first strand
Strand 2	D	219	225	anti-parallel
Strand 3	D	171	177	anti-parallel
Strand 4	D	197	198	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	212	215	anti-parallel
Strand 3	D	180	184	anti-parallel
Strand 4	D	187	192	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	274	first strand
Strand 2	D	336	349	anti-parallel
Strand 3	D	289	302	anti-parallel
Strand 4	D	311	316	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	279	281	first strand
Strand 2	D	336	349	anti-parallel
Strand 3	D	289	302	anti-parallel
Strand 4	D	321	322	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	156	first strand
Strand 2	E	219	225	anti-parallel
Strand 3	E	171	177	anti-parallel
Strand 4	E	197	198	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	163	first strand
Strand 2	E	212	215	anti-parallel
Strand 3	E	179	184	anti-parallel
Strand 4	E	187	193	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	274	first strand
Strand 2	E	336	349	anti-parallel
Strand 3	E	289	301	anti-parallel
Strand 4	E	314	316	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	279	281	first strand
Strand 2	E	336	349	anti-parallel
Strand 3	E	289	301	anti-parallel
Strand 4	E	321	322	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	156	first strand
Strand 2	F	219	225	anti-parallel
Strand 3	F	171	177	anti-parallel
Strand 4	F	197	198	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	163	first strand
Strand 2	F	212	215	anti-parallel
Strand 3	F	179	184	anti-parallel
Strand 4	F	187	193	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	270	274	first strand
Strand 2	F	336	349	anti-parallel
Strand 3	F	289	301	anti-parallel
Strand 4	F	314	316	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	279	281	first strand
Strand 2	F	336	349	anti-parallel
Strand 3	F	289	301	anti-parallel
Strand 4	F	321	322	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	156	first strand
Strand 2	G	219	225	anti-parallel
Strand 3	G	171	177	anti-parallel
Strand 4	G	197	198	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	161	163	first strand
Strand 2	G	212	215	anti-parallel
Strand 3	G	180	184	anti-parallel
Strand 4	G	187	192	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	270	274	first strand
Strand 2	G	336	349	anti-parallel
Strand 3	G	289	302	anti-parallel
Strand 4	G	311	316	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	279	281	first strand
Strand 2	G	336	349	anti-parallel
Strand 3	G	289	302	anti-parallel
Strand 4	G	321	322	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	156	first strand
Strand 2	H	219	225	anti-parallel
Strand 3	H	171	177	anti-parallel
Strand 4	H	197	198	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	161	163	first strand
Strand 2	H	212	215	anti-parallel
Strand 3	H	180	184	anti-parallel
Strand 4	H	187	192	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	271	272	first strand
Strand 2	H	338	349	anti-parallel
Strand 3	H	289	299	anti-parallel
Strand 4	H	315	316	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	271	272	first strand
Strand 2	H	338	349	anti-parallel
Strand 3	H	289	299	anti-parallel
Strand 4	H	321	322	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LZ4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LZ4