Analysis of interatomic Contacts of Structural Units in PDB entry:
7LZJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LZJ entry

There are 3 chains in PDB entry 7LZJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 191	SER 906
B	LEU 191	SER 906
C	LEU 191	SER 906

There are 42 helices in PDB entry 7LZJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	205	211	Right-handed alpha
Helix 2	AA2	A	277	280	Right-handed 310
Helix 3	AA3	A	301	315	Right-handed alpha
Helix 4	AA4	A	473	478	Right-handed alpha
Helix 5	AA5	A	558	560	Right-handed 310
Helix 6	AA6	A	561	569	Right-handed alpha
Helix 7	AA7	A	643	646	Right-handed 310
Helix 8	AA8	A	653	659	Right-handed alpha
Helix 9	AA9	A	662	665	Right-handed 310
Helix 10	AB1	A	773	775	Right-handed 310
Helix 11	AB2	A	784	788	Right-handed 310
Helix 12	AB3	A	823	827	Right-handed alpha
Helix 13	AB4	A	862	867	Right-handed alpha
Helix 14	AB5	A	887	902	Right-handed alpha
Helix 15	AB6	B	195	200	Right-handed 310
Helix 16	AB7	B	205	211	Right-handed alpha
Helix 17	AB8	B	277	280	Right-handed 310
Helix 18	AB9	B	301	315	Right-handed alpha
Helix 19	AC1	B	473	478	Right-handed alpha
Helix 20	AC2	B	561	569	Right-handed alpha
Helix 21	AC3	B	643	646	Right-handed 310
Helix 22	AC4	B	653	659	Right-handed alpha
Helix 23	AC5	B	662	665	Right-handed 310
Helix 24	AC6	B	773	775	Right-handed 310
Helix 25	AC7	B	784	788	Right-handed 310
Helix 26	AC8	B	823	827	Right-handed alpha
Helix 27	AC9	B	862	867	Right-handed alpha
Helix 28	AD1	B	887	902	Right-handed alpha
Helix 29	AD2	C	195	200	Right-handed 310
Helix 30	AD3	C	205	211	Right-handed alpha
Helix 31	AD4	C	277	280	Right-handed 310
Helix 32	AD5	C	301	315	Right-handed alpha
Helix 33	AD6	C	473	478	Right-handed alpha
Helix 34	AD7	C	561	569	Right-handed alpha
Helix 35	AD8	C	643	646	Right-handed 310
Helix 36	AD9	C	653	659	Right-handed alpha
Helix 37	AE1	C	662	666	Right-handed 310
Helix 38	AE2	C	773	775	Right-handed 310
Helix 39	AE3	C	784	788	Right-handed 310
Helix 40	AE4	C	823	827	Right-handed alpha
Helix 41	AE5	C	862	867	Right-handed alpha
Helix 42	AE6	C	887	902	Right-handed alpha

There are 26 sheets in PDB entry 7LZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	223	first strand
Strand 2	A	241	246	anti-parallel
Strand 3	A	263	267	anti-parallel
Strand 4	A	257	260	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	275	first strand
Strand 2	A	318	320	parallel
Strand 3	A	341	343	parallel
Strand 4	A	375	382	parallel
Strand 5	A	404	411	parallel
Strand 6	A	429	436	parallel
Strand 7	A	461	463	parallel
Strand 8	A	508	513	parallel
Strand 9	A	535	540	parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	328	first strand
Strand 2	A	348	352	parallel
Strand 3	A	375	382	parallel
Strand 4	A	404	411	parallel
Strand 5	A	429	436	parallel
Strand 6	A	466	468	parallel
Strand 7	A	516	518	parallel
Strand 8	A	543	548	parallel
Strand 9	A	593	597	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	336	first strand
Strand 2	A	364	368	parallel
Strand 3	A	389	393	parallel
Strand 4	A	415	419	parallel
Strand 5	A	441	446	parallel
Strand 6	A	499	505	parallel
Strand 7	A	525	532	parallel
Strand 8	A	576	581	parallel
Strand 9	A	600	605	parallel
Strand 10	A	626	628	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	480	482	first strand
Strand 2	A	488	490	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	613	first strand
Strand 2	A	640	641	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	795	801	first strand
Strand 2	A	749	757	anti-parallel
Strand 3	A	838	845	anti-parallel
Strand 4	A	667	674	anti-parallel
Strand 5	C	858	859	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	712	first strand
Strand 2	A	821	822	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	732	first strand
Strand 2	A	808	815	anti-parallel
Strand 3	A	764	771	anti-parallel
Strand 4	A	777	781	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	858	859	first strand
Strand 2	B	667	674	anti-parallel
Strand 3	B	838	845	anti-parallel
Strand 4	B	749	757	anti-parallel
Strand 5	B	795	801	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	223	first strand
Strand 2	B	241	246	anti-parallel
Strand 3	B	263	267	anti-parallel
Strand 4	B	257	260	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	275	first strand
Strand 2	B	318	320	parallel
Strand 3	B	341	343	parallel
Strand 4	B	375	382	parallel
Strand 5	B	404	411	parallel
Strand 6	B	429	430	parallel
Strand 7	B	461	463	parallel
Strand 8	B	508	513	parallel
Strand 9	B	535	540	parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	328	first strand
Strand 2	B	348	352	parallel
Strand 3	B	375	382	parallel
Strand 4	B	404	411	parallel
Strand 5	B	434	436	parallel
Strand 6	B	466	468	parallel
Strand 7	B	516	518	parallel
Strand 8	B	543	548	parallel
Strand 9	B	593	597	parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	336	first strand
Strand 2	B	364	368	parallel
Strand 3	B	389	393	parallel
Strand 4	B	415	419	parallel
Strand 5	B	441	446	parallel
Strand 6	B	499	505	parallel
Strand 7	B	525	532	parallel
Strand 8	B	576	581	parallel
Strand 9	B	600	605	parallel
Strand 10	B	626	628	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	480	482	first strand
Strand 2	B	488	490	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	612	613	first strand
Strand 2	B	640	641	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	712	first strand
Strand 2	B	821	822	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	732	first strand
Strand 2	B	808	815	anti-parallel
Strand 3	B	764	771	anti-parallel
Strand 4	B	777	781	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	858	859	first strand
Strand 2	C	669	674	anti-parallel
Strand 3	C	838	845	anti-parallel
Strand 4	C	749	757	anti-parallel
Strand 5	C	795	801	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	223	first strand
Strand 2	C	241	247	anti-parallel
Strand 3	C	263	267	anti-parallel
Strand 4	C	257	260	anti-parallel

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There are 10 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	275	first strand
Strand 2	C	318	320	parallel
Strand 3	C	341	343	parallel
Strand 4	C	375	382	parallel
Strand 5	C	404	411	parallel
Strand 6	C	429	436	parallel
Strand 7	C	466	468	parallel
Strand 8	C	516	518	parallel
Strand 9	C	543	548	parallel
Strand 10	C	593	597	parallel

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There are 11 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	328	first strand
Strand 2	C	348	352	parallel
Strand 3	C	375	382	parallel
Strand 4	C	404	411	parallel
Strand 5	C	429	436	parallel
Strand 6	C	461	463	parallel
Strand 7	C	508	513	parallel
Strand 8	C	535	540	parallel
Strand 9	C	587	589	parallel
Strand 10	C	612	613	parallel
Strand 11	C	640	641	parallel

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There are 10 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	334	336	first strand
Strand 2	C	364	368	parallel
Strand 3	C	389	393	parallel
Strand 4	C	415	419	parallel
Strand 5	C	441	446	parallel
Strand 6	C	502	505	parallel
Strand 7	C	529	532	parallel
Strand 8	C	576	581	parallel
Strand 9	C	600	605	parallel
Strand 10	C	626	628	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	480	482	first strand
Strand 2	C	488	490	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	712	first strand
Strand 2	C	821	822	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	727	732	first strand
Strand 2	C	808	815	anti-parallel
Strand 3	C	764	771	anti-parallel
Strand 4	C	777	781	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LZJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LZJ