Analysis of interatomic Contacts of Structural Units in PDB entry:
7M05

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M05 entry

There are 8 chains in PDB entry 7M05 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 13	LEU 637
B	ALA 23	PRO 328
C	ARG 13	LEU 637
D	ALA 23	PRO 328
E	ARG 13	LEU 637
F	ALA 23	PRO 328
G	ARG 13	LEU 637
H	ALA 23	PRO 328

There are 84 helices in PDB entry 7M05. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	37	Right-handed alpha
Helix 2	AA2	A	58	62	Right-handed 310
Helix 3	AA3	A	74	81	Right-handed alpha
Helix 4	AA4	A	96	118	Right-handed alpha
Helix 5	AA5	A	131	143	Right-handed alpha
Helix 6	AA6	A	160	164	Right-handed 310
Helix 7	AA7	A	183	197	Right-handed alpha
Helix 8	AA8	A	215	221	Right-handed alpha
Helix 9	AA9	A	234	236	Right-handed 310
Helix 10	AB1	A	247	261	Right-handed alpha
Helix 11	AB2	A	276	290	Right-handed alpha
Helix 12	AB3	A	295	301	Right-handed alpha
Helix 13	AB4	A	320	328	Right-handed alpha
Helix 14	AB5	A	330	349	Right-handed alpha
Helix 15	AB6	A	369	383	Right-handed alpha
Helix 16	AB7	A	394	408	Right-handed alpha
Helix 17	AB8	A	445	454	Right-handed alpha
Helix 18	AB9	A	477	486	Right-handed alpha
Helix 19	AC1	A	495	499	Right-handed 310
Helix 20	AC2	A	627	631	Right-handed 310
Helix 21	AC3	B	63	67	Right-handed 310
Helix 22	AC4	C	25	37	Right-handed alpha
Helix 23	AC5	C	58	62	Right-handed 310
Helix 24	AC6	C	74	81	Right-handed alpha
Helix 25	AC7	C	96	118	Right-handed alpha
Helix 26	AC8	C	131	143	Right-handed alpha
Helix 27	AC9	C	160	164	Right-handed 310
Helix 28	AD1	C	183	197	Right-handed alpha
Helix 29	AD2	C	215	221	Right-handed alpha
Helix 30	AD3	C	234	236	Right-handed 310
Helix 31	AD4	C	247	261	Right-handed alpha
Helix 32	AD5	C	276	290	Right-handed alpha
Helix 33	AD6	C	295	301	Right-handed alpha
Helix 34	AD7	C	320	328	Right-handed alpha
Helix 35	AD8	C	330	349	Right-handed alpha
Helix 36	AD9	C	369	383	Right-handed alpha
Helix 37	AE1	C	394	408	Right-handed alpha
Helix 38	AE2	C	445	454	Right-handed alpha
Helix 39	AE3	C	477	486	Right-handed alpha
Helix 40	AE4	C	495	499	Right-handed 310
Helix 41	AE5	C	627	631	Right-handed 310
Helix 42	AE6	D	63	67	Right-handed 310
Helix 43	AE7	E	25	37	Right-handed alpha
Helix 44	AE8	E	58	62	Right-handed 310
Helix 45	AE9	E	74	81	Right-handed alpha
Helix 46	AF1	E	96	118	Right-handed alpha
Helix 47	AF2	E	131	143	Right-handed alpha
Helix 48	AF3	E	160	164	Right-handed 310
Helix 49	AF4	E	183	197	Right-handed alpha
Helix 50	AF5	E	215	221	Right-handed alpha
Helix 51	AF6	E	234	236	Right-handed 310
Helix 52	AF7	E	247	261	Right-handed alpha
Helix 53	AF8	E	276	290	Right-handed alpha
Helix 54	AF9	E	295	301	Right-handed alpha
Helix 55	AG1	E	320	328	Right-handed alpha
Helix 56	AG2	E	330	349	Right-handed alpha
Helix 57	AG3	E	369	383	Right-handed alpha
Helix 58	AG4	E	394	408	Right-handed alpha
Helix 59	AG5	E	445	454	Right-handed alpha
Helix 60	AG6	E	477	486	Right-handed alpha
Helix 61	AG7	E	495	499	Right-handed 310
Helix 62	AG8	E	627	631	Right-handed 310
Helix 63	AG9	F	63	67	Right-handed 310
Helix 64	AH1	G	25	37	Right-handed alpha
Helix 65	AH2	G	58	62	Right-handed 310
Helix 66	AH3	G	74	81	Right-handed alpha
Helix 67	AH4	G	96	118	Right-handed alpha
Helix 68	AH5	G	131	143	Right-handed alpha
Helix 69	AH6	G	160	164	Right-handed 310
Helix 70	AH7	G	183	197	Right-handed alpha
Helix 71	AH8	G	215	221	Right-handed alpha
Helix 72	AH9	G	234	236	Right-handed 310
Helix 73	AI1	G	247	261	Right-handed alpha
Helix 74	AI2	G	276	290	Right-handed alpha
Helix 75	AI3	G	295	301	Right-handed alpha
Helix 76	AI4	G	320	328	Right-handed alpha
Helix 77	AI5	G	330	349	Right-handed alpha
Helix 78	AI6	G	369	383	Right-handed alpha
Helix 79	AI7	G	394	408	Right-handed alpha
Helix 80	AI8	G	445	454	Right-handed alpha
Helix 81	AI9	G	477	486	Right-handed alpha
Helix 82	AJ1	G	495	499	Right-handed 310
Helix 83	AJ2	G	627	631	Right-handed 310
Helix 84	AJ3	H	63	67	Right-handed 310

There are 52 sheets in PDB entry 7M05. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	19	first strand
Strand 2	A	40	44	parallel
Strand 3	A	82	85	parallel
Strand 4	A	121	125	parallel
Strand 5	A	150	156	parallel
Strand 6	A	202	207	parallel
Strand 7	A	226	232	parallel
Strand 8	A	263	267	parallel
Strand 9	A	16	19	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	238	first strand
Strand 2	A	244	245	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	417	first strand
Strand 2	A	386	392	parallel
Strand 3	A	359	364	parallel
Strand 4	A	429	433	parallel
Strand 5	A	457	464	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	502	503	first strand
Strand 2	A	582	592	anti-parallel
Strand 3	A	546	560	anti-parallel
Strand 4	A	467	476	anti-parallel
Strand 5	A	516	522	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	511	first strand
Strand 2	A	467	476	anti-parallel
Strand 3	A	546	560	anti-parallel
Strand 4	A	563	566	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	541	first strand
Strand 2	A	597	606	anti-parallel
Strand 3	A	610	619	anti-parallel
Strand 4	A	635	636	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	36	first strand
Strand 2	B	42	47	anti-parallel
Strand 3	B	56	61	anti-parallel
Strand 4	B	75	79	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	89	first strand
Strand 2	B	93	98	anti-parallel
Strand 3	B	102	108	anti-parallel
Strand 4	B	115	122	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	133	first strand
Strand 2	B	139	144	anti-parallel
Strand 3	B	149	153	anti-parallel
Strand 4	B	158	163	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	175	first strand
Strand 2	B	182	187	anti-parallel
Strand 3	B	192	196	anti-parallel
Strand 4	B	203	205	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	220	first strand
Strand 2	B	228	232	anti-parallel
Strand 3	B	236	240	anti-parallel
Strand 4	B	249	252	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	263	first strand
Strand 2	B	271	275	anti-parallel
Strand 3	B	280	283	anti-parallel
Strand 4	B	289	293	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	305	first strand
Strand 2	B	312	317	anti-parallel
Strand 3	B	322	326	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	19	first strand
Strand 2	C	40	44	parallel
Strand 3	C	82	85	parallel
Strand 4	C	121	125	parallel
Strand 5	C	150	156	parallel
Strand 6	C	202	207	parallel
Strand 7	C	226	232	parallel
Strand 8	C	263	267	parallel
Strand 9	C	16	19	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	238	first strand
Strand 2	C	244	245	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	417	first strand
Strand 2	C	386	392	parallel
Strand 3	C	359	364	parallel
Strand 4	C	429	433	parallel
Strand 5	C	457	464	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	503	first strand
Strand 2	C	582	592	anti-parallel
Strand 3	C	546	560	anti-parallel
Strand 4	C	467	476	anti-parallel
Strand 5	C	516	522	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	510	511	first strand
Strand 2	C	467	476	anti-parallel
Strand 3	C	546	560	anti-parallel
Strand 4	C	563	566	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	541	first strand
Strand 2	C	597	606	anti-parallel
Strand 3	C	610	619	anti-parallel
Strand 4	C	635	636	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	36	first strand
Strand 2	D	42	47	anti-parallel
Strand 3	D	56	61	anti-parallel
Strand 4	D	75	79	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	89	first strand
Strand 2	D	93	98	anti-parallel
Strand 3	D	102	108	anti-parallel
Strand 4	D	115	122	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	133	first strand
Strand 2	D	139	144	anti-parallel
Strand 3	D	149	153	anti-parallel
Strand 4	D	158	163	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	175	first strand
Strand 2	D	182	187	anti-parallel
Strand 3	D	192	196	anti-parallel
Strand 4	D	203	205	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	220	first strand
Strand 2	D	228	232	anti-parallel
Strand 3	D	236	240	anti-parallel
Strand 4	D	249	252	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	263	first strand
Strand 2	D	271	275	anti-parallel
Strand 3	D	280	283	anti-parallel
Strand 4	D	289	293	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	305	first strand
Strand 2	D	312	317	anti-parallel
Strand 3	D	322	326	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	19	first strand
Strand 2	E	40	44	parallel
Strand 3	E	82	85	parallel
Strand 4	E	121	125	parallel
Strand 5	E	150	156	parallel
Strand 6	E	202	207	parallel
Strand 7	E	226	232	parallel
Strand 8	E	263	267	parallel
Strand 9	E	16	19	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	237	238	first strand
Strand 2	E	244	245	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	413	417	first strand
Strand 2	E	386	392	parallel
Strand 3	E	359	364	parallel
Strand 4	E	429	433	parallel
Strand 5	E	457	464	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	502	503	first strand
Strand 2	E	582	592	anti-parallel
Strand 3	E	546	560	anti-parallel
Strand 4	E	467	476	anti-parallel
Strand 5	E	516	522	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	510	511	first strand
Strand 2	E	467	476	anti-parallel
Strand 3	E	546	560	anti-parallel
Strand 4	E	563	566	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	534	541	first strand
Strand 2	E	597	606	anti-parallel
Strand 3	E	610	619	anti-parallel
Strand 4	E	635	636	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	36	first strand
Strand 2	F	42	47	anti-parallel
Strand 3	F	56	61	anti-parallel
Strand 4	F	75	79	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	89	first strand
Strand 2	F	93	98	anti-parallel
Strand 3	F	102	108	anti-parallel
Strand 4	F	115	122	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	128	133	first strand
Strand 2	F	139	144	anti-parallel
Strand 3	F	149	153	anti-parallel
Strand 4	F	158	163	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	170	175	first strand
Strand 2	F	182	187	anti-parallel
Strand 3	F	192	196	anti-parallel
Strand 4	F	203	205	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	215	220	first strand
Strand 2	F	228	232	anti-parallel
Strand 3	F	236	240	anti-parallel
Strand 4	F	249	252	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	263	first strand
Strand 2	F	271	275	anti-parallel
Strand 3	F	280	283	anti-parallel
Strand 4	F	289	293	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	300	305	first strand
Strand 2	F	312	317	anti-parallel
Strand 3	F	322	326	anti-parallel

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There are 9 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	16	19	first strand
Strand 2	G	40	44	parallel
Strand 3	G	82	85	parallel
Strand 4	G	121	125	parallel
Strand 5	G	150	156	parallel
Strand 6	G	202	207	parallel
Strand 7	G	226	232	parallel
Strand 8	G	263	267	parallel
Strand 9	G	16	19	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	237	238	first strand
Strand 2	G	244	245	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	413	417	first strand
Strand 2	G	386	392	parallel
Strand 3	G	359	364	parallel
Strand 4	G	429	433	parallel
Strand 5	G	457	464	parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	502	503	first strand
Strand 2	G	582	592	anti-parallel
Strand 3	G	546	560	anti-parallel
Strand 4	G	467	476	anti-parallel
Strand 5	G	516	522	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	510	511	first strand
Strand 2	G	467	476	anti-parallel
Strand 3	G	546	560	anti-parallel
Strand 4	G	563	566	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	534	541	first strand
Strand 2	G	597	606	anti-parallel
Strand 3	G	610	619	anti-parallel
Strand 4	G	635	636	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	36	first strand
Strand 2	H	42	47	anti-parallel
Strand 3	H	56	61	anti-parallel
Strand 4	H	75	79	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	83	89	first strand
Strand 2	H	93	98	anti-parallel
Strand 3	H	102	108	anti-parallel
Strand 4	H	115	122	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	133	first strand
Strand 2	H	139	144	anti-parallel
Strand 3	H	149	153	anti-parallel
Strand 4	H	158	163	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	175	first strand
Strand 2	H	182	187	anti-parallel
Strand 3	H	192	196	anti-parallel
Strand 4	H	203	205	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	215	220	first strand
Strand 2	H	228	232	anti-parallel
Strand 3	H	236	240	anti-parallel
Strand 4	H	249	252	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	258	263	first strand
Strand 2	H	271	275	anti-parallel
Strand 3	H	280	283	anti-parallel
Strand 4	H	289	293	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	300	305	first strand
Strand 2	H	312	317	anti-parallel
Strand 3	H	322	326	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 7M05

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M05