Analysis of interatomic Contacts of Structural Units in PDB entry:
7M0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M0A entry

There are 5 chains in PDB entry 7M0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 236TRP 575
T
 C 1 A 5
P
 C 1 DT 7
D
 G 1 G 4
U
 G 1 G 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7M0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
239 243Right-handed 310
Helix 2
AA2
A
244 251Right-handed 310
Helix 3
AA3
A
253 270Right-handed alpha
Helix 4
AA4
A
272 289Right-handed alpha
Helix 5
AA5
A
295 302Right-handed alpha
Helix 6
AA6
A
306 320Right-handed alpha
Helix 7
AA7
A
322 327Right-handed 310
Helix 8
AA8
A
331 340Right-handed alpha
Helix 9
AA9
A
345 355Right-handed alpha
Helix 10
AB1
A
359 367Right-handed alpha
Helix 11
AB2
A
370 379Right-handed alpha
Helix 12
AB3
A
379 385Right-handed alpha
Helix 13
AB4
A
389 405Right-handed alpha
Helix 14
AB5
A
415 420Right-handed alpha
Helix 15
AB6
A
442 454Right-handed alpha
Helix 16
AB7
A
495 497Right-handed 310
Helix 17
AB8
A
498 508Right-handed alpha
Helix 18
AB9
A
509 523Right-handed alpha
Helix 19
AC1
A
555 563Right-handed alpha
Helix 20
AC2
A
569 574Right-handed 310
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There are 3 sheets in PDB entry 7M0A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
424 425anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
427 433anti-parallel
Strand 3
A
487 493parallel
Strand 4
A
472 477anti-parallel
Strand 5
A
457 462anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
532 534anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il