Analysis of interatomic Contacts of Structural Units in PDB entry:
7M0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M0O entry

There is 1 chain in PDB entry 7M0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8GLY 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7M0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 26Right-handed alpha
Helix 2
AA2
A
38 51Right-handed alpha
Helix 3
AA3
A
83 96Right-handed alpha
Helix 4
AA4
A
106 111Right-handed alpha
Helix 5
AA5
A
114 124Right-handed alpha
Helix 6
AA6
A
159 169Right-handed alpha
Helix 7
AA7
A
170 172Right-handed 310
Helix 8
AA8
A
187 199Right-handed alpha
Helix 9
AA9
A
227 241Right-handed alpha
Helix 10
AB1
A
257 260Right-handed 310
Helix 11
AB2
A
261 269Right-handed alpha
Helix 12
AB3
A
296 300Right-handed 310
Helix 13
AB4
A
301 309Right-handed alpha
Helix 14
AB5
A
310 312Right-handed 310
Helix 15
AB6
A
321 327Right-handed 310
Helix 16
AB7
A
330 342Right-handed alpha
Helix 17
AB8
A
370 381Right-handed alpha
Helix 18
AB9
A
391 398Right-handed 310
Helix 19
AC1
A
401 412Right-handed alpha
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There are 6 sheets in PDB entry 7M0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
61 65anti-parallel
Strand 3
A
29 33anti-parallel
Strand 4
A
221 223parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 79first strand
Strand 2
A
98 104parallel
Strand 3
A
139 144anti-parallel
Strand 4
A
127 130anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
176 179parallel
Strand 3
A
209 212anti-parallel
Strand 4
A
204 206anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
279 283anti-parallel
Strand 3
A
272 275anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 294first strand
Strand 2
A
316 319parallel
Strand 3
A
352 356anti-parallel
Strand 4
A
345 349anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
388 389parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il