Analysis of interatomic Contacts of Structural Units in PDB entry:
7M15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M15 entry

There are 6 chains in PDB entry 7M15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LYS 178
B
 HIS 0LYS 178
C
 HIS 0THR 177
D
 MET 1GLY 181
E
 HIS 0LYS 178
F
 HIS 0LYS 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7M15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 42Right-handed alpha
Helix 2
AA2
A
144 148Right-handed 310
Helix 3
AA3
A
170 176Right-handed alpha
Helix 4
AA4
B
37 41Right-handed alpha
Helix 5
AA5
B
42 44Right-handed 310
Helix 6
AA6
B
144 148Right-handed 310
Helix 7
AA7
B
170 177Right-handed alpha
Helix 8
AA8
C
37 41Right-handed alpha
Helix 9
AA9
C
42 44Right-handed 310
Helix 10
AB1
C
144 148Right-handed 310
Helix 11
AB2
C
170 176Right-handed alpha
Helix 12
AB3
D
37 42Right-handed alpha
Helix 13
AB4
D
144 148Right-handed 310
Helix 14
AB5
D
170 176Right-handed alpha
Helix 15
AB6
E
37 41Right-handed alpha
Helix 16
AB7
E
42 44Right-handed 310
Helix 17
AB8
E
144 148Right-handed 310
Helix 18
AB9
E
170 176Right-handed alpha
Helix 19
AC1
F
37 41Right-handed alpha
Helix 20
AC2
F
42 44Right-handed 310
Helix 21
AC3
F
144 148Right-handed 310
Helix 22
AC4
F
170 176Right-handed alpha
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There are 12 sheets in PDB entry 7M15. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
17 21anti-parallel
Strand 3
A
112 115anti-parallel
Strand 4
A
73 80anti-parallel
Strand 5
A
129 137anti-parallel
Strand 6
A
50 59anti-parallel
Strand 7
B
29 36anti-parallel
Strand 8
B
24 26anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
29 36anti-parallel
Strand 3
B
50 59anti-parallel
Strand 4
B
129 137anti-parallel
Strand 5
B
73 80anti-parallel
Strand 6
B
112 115anti-parallel
Strand 7
B
17 21anti-parallel
Strand 8
B
5 9anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 105first strand
Strand 2
A
83 89anti-parallel
Strand 3
A
119 125anti-parallel
Strand 4
A
63 68anti-parallel
Strand 5
A
149 150anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 105first strand
Strand 2
B
83 89anti-parallel
Strand 3
B
119 125anti-parallel
Strand 4
B
63 68anti-parallel
Strand 5
B
149 150anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 9first strand
Strand 2
C
17 21anti-parallel
Strand 3
C
112 115anti-parallel
Strand 4
C
73 80anti-parallel
Strand 5
C
129 137anti-parallel
Strand 6
C
50 59anti-parallel
Strand 7
D
29 36anti-parallel
Strand 8
D
24 26anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
29 36anti-parallel
Strand 3
D
52 59anti-parallel
Strand 4
D
129 137anti-parallel
Strand 5
D
73 80anti-parallel
Strand 6
D
112 115anti-parallel
Strand 7
D
17 21anti-parallel
Strand 8
D
5 9anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
83 89anti-parallel
Strand 3
C
119 125anti-parallel
Strand 4
C
63 68anti-parallel
Strand 5
C
149 150anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
100 105first strand
Strand 2
D
83 89anti-parallel
Strand 3
D
119 125anti-parallel
Strand 4
D
63 68anti-parallel
Strand 5
D
149 150anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 9first strand
Strand 2
E
17 21anti-parallel
Strand 3
E
112 115anti-parallel
Strand 4
E
73 80anti-parallel
Strand 5
E
129 137anti-parallel
Strand 6
E
50 59anti-parallel
Strand 7
F
29 36anti-parallel
Strand 8
F
24 26anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 26first strand
Strand 2
E
29 36anti-parallel
Strand 3
F
50 59anti-parallel
Strand 4
F
129 137anti-parallel
Strand 5
F
73 80anti-parallel
Strand 6
F
112 115anti-parallel
Strand 7
F
17 21anti-parallel
Strand 8
F
5 9anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 105first strand
Strand 2
E
83 89anti-parallel
Strand 3
E
119 125anti-parallel
Strand 4
E
63 68anti-parallel
Strand 5
E
149 150anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 105first strand
Strand 2
F
83 89anti-parallel
Strand 3
F
119 125anti-parallel
Strand 4
F
63 68anti-parallel
Strand 5
F
149 150anti-parallel
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