Analysis of interatomic Contacts of Structural Units in PDB entry:
7M17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M17 entry

There are 6 chains in PDB entry 7M17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15ASN 408
B
 PRO 15ASN 408
C
 PRO 15ASN 408
D
 PRO 15ASN 408
E
 PRO 15ASN 408
F
 PRO 15ASN 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 7M17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed 310
Helix 2
AA2
A
22 25Right-handed 310
Helix 3
AA3
A
26 49Right-handed alpha
Helix 4
AA4
A
102 116Right-handed alpha
Helix 5
AA5
A
119 146Right-handed alpha
Helix 6
AA6
A
146 166Right-handed alpha
Helix 7
AA7
A
167 174Right-handed alpha
Helix 8
AA8
A
234 255Right-handed alpha
Helix 9
AA9
A
258 286Right-handed alpha
Helix 10
AB1
A
287 289Right-handed 310
Helix 11
AB2
A
314 346Right-handed alpha
Helix 12
AB3
A
353 361Right-handed alpha
Helix 13
AB4
A
372 381Right-handed alpha
Helix 14
AB5
A
384 390Right-handed alpha
Helix 15
AB6
A
395 408Right-handed alpha
Helix 16
AB7
B
17 21Right-handed 310
Helix 17
AB8
B
22 25Right-handed 310
Helix 18
AB9
B
26 49Right-handed alpha
Helix 19
AC1
B
102 116Right-handed alpha
Helix 20
AC2
B
120 146Right-handed alpha
Helix 21
AC3
B
146 166Right-handed alpha
Helix 22
AC4
B
167 174Right-handed alpha
Helix 23
AC5
B
234 255Right-handed alpha
Helix 24
AC6
B
258 286Right-handed alpha
Helix 25
AC7
B
287 289Right-handed 310
Helix 26
AC8
B
314 347Right-handed alpha
Helix 27
AC9
B
353 361Right-handed alpha
Helix 28
AD1
B
372 381Right-handed alpha
Helix 29
AD2
B
383 389Right-handed alpha
Helix 30
AD3
B
391 394Right-handed 310
Helix 31
AD4
B
395 408Right-handed alpha
Helix 32
AD5
C
16 22Right-handed 310
Helix 33
AD6
C
23 49Right-handed alpha
Helix 34
AD7
C
102 116Right-handed alpha
Helix 35
AD8
C
119 146Right-handed alpha
Helix 36
AD9
C
146 165Right-handed alpha
Helix 37
AE1
C
167 174Right-handed alpha
Helix 38
AE2
C
234 255Right-handed alpha
Helix 39
AE3
C
258 286Right-handed alpha
Helix 40
AE4
C
287 289Right-handed 310
Helix 41
AE5
C
314 346Right-handed alpha
Helix 42
AE6
C
353 361Right-handed alpha
Helix 43
AE7
C
372 383Right-handed alpha
Helix 44
AE8
C
383 389Right-handed alpha
Helix 45
AE9
C
390 394Right-handed 310
Helix 46
AF1
C
395 408Right-handed alpha
Helix 47
AF2
D
16 20Right-handed 310
Helix 48
AF3
D
23 49Right-handed alpha
Helix 49
AF4
D
102 117Right-handed alpha
Helix 50
AF5
D
119 123Right-handed 310
Helix 51
AF6
D
124 146Right-handed alpha
Helix 52
AF7
D
146 166Right-handed alpha
Helix 53
AF8
D
167 174Right-handed alpha
Helix 54
AF9
D
234 256Right-handed alpha
Helix 55
AG1
D
258 286Right-handed alpha
Helix 56
AG2
D
287 289Right-handed 310
Helix 57
AG3
D
314 347Right-handed alpha
Helix 58
AG4
D
353 361Right-handed alpha
Helix 59
AG5
D
372 381Right-handed alpha
Helix 60
AG6
D
383 390Right-handed alpha
Helix 61
AG7
D
391 394Right-handed 310
Helix 62
AG8
D
395 408Right-handed alpha
Helix 63
AG9
E
17 21Right-handed 310
Helix 64
AH1
E
22 25Right-handed 310
Helix 65
AH2
E
26 49Right-handed alpha
Helix 66
AH3
E
102 117Right-handed alpha
Helix 67
AH4
E
119 146Right-handed alpha
Helix 68
AH5
E
146 165Right-handed alpha
Helix 69
AH6
E
167 174Right-handed alpha
Helix 70
AH7
E
234 255Right-handed alpha
Helix 71
AH8
E
258 286Right-handed alpha
Helix 72
AH9
E
287 289Right-handed 310
Helix 73
AI1
E
314 347Right-handed alpha
Helix 74
AI2
E
353 361Right-handed alpha
Helix 75
AI3
E
372 381Right-handed alpha
Helix 76
AI4
E
384 389Right-handed alpha
Helix 77
AI5
E
390 394Right-handed 310
Helix 78
AI6
E
395 408Right-handed alpha
Helix 79
AI7
F
16 22Right-handed 310
Helix 80
AI8
F
23 49Right-handed alpha
Helix 81
AI9
F
102 117Right-handed alpha
Helix 82
AJ1
F
119 146Right-handed alpha
Helix 83
AJ2
F
146 165Right-handed alpha
Helix 84
AJ3
F
167 174Right-handed alpha
Helix 85
AJ4
F
234 255Right-handed alpha
Helix 86
AJ5
F
258 286Right-handed alpha
Helix 87
AJ6
F
287 289Right-handed 310
Helix 88
AJ7
F
314 346Right-handed alpha
Helix 89
AJ8
F
353 361Right-handed alpha
Helix 90
AJ9
F
372 383Right-handed alpha
Helix 91
AK1
F
383 390Right-handed alpha
Helix 92
AK2
F
395 408Right-handed alpha
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There are 10 sheets in PDB entry 7M17. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
308 311anti-parallel
Strand 3
A
294 295anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
308 311anti-parallel
Strand 3
B
292 295anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
64 65anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 56first strand
Strand 2
C
307 311anti-parallel
Strand 3
C
292 296anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 61first strand
Strand 2
C
64 65anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 56first strand
Strand 2
D
308 311anti-parallel
Strand 3
D
292 293anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 61first strand
Strand 2
D
64 65anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 56first strand
Strand 2
E
307 311anti-parallel
Strand 3
E
292 296anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
60 61first strand
Strand 2
E
64 65anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 56first strand
Strand 2
F
307 311anti-parallel
Strand 3
F
292 296anti-parallel
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