Analysis of interatomic Contacts of Structural Units in PDB entry:
7M19

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M19 entry

There are 6 chains in PDB entry 7M19 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 15	ASN 408
B	PRO 15	ASN 408
C	PRO 15	ASN 408
D	PRO 15	ASN 408
E	PRO 15	ASN 408
F	PRO 15	ASN 408

There are 86 helices in PDB entry 7M19. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	22	Right-handed 310
Helix 2	AA2	A	23	49	Right-handed alpha
Helix 3	AA3	A	102	116	Right-handed alpha
Helix 4	AA4	A	120	146	Right-handed alpha
Helix 5	AA5	A	146	165	Right-handed alpha
Helix 6	AA6	A	167	174	Right-handed alpha
Helix 7	AA7	A	234	255	Right-handed alpha
Helix 8	AA8	A	258	286	Right-handed alpha
Helix 9	AA9	A	287	289	Right-handed 310
Helix 10	AB1	A	314	346	Right-handed alpha
Helix 11	AB2	A	353	361	Right-handed alpha
Helix 12	AB3	A	372	383	Right-handed alpha
Helix 13	AB4	A	384	390	Right-handed alpha
Helix 14	AB5	A	391	394	Right-handed 310
Helix 15	AB6	A	395	408	Right-handed alpha
Helix 16	AB7	B	16	21	Right-handed 310
Helix 17	AB8	B	22	25	Right-handed 310
Helix 18	AB9	B	26	49	Right-handed alpha
Helix 19	AC1	B	102	116	Right-handed alpha
Helix 20	AC2	B	120	146	Right-handed alpha
Helix 21	AC3	B	146	166	Right-handed alpha
Helix 22	AC4	B	167	174	Right-handed alpha
Helix 23	AC5	B	234	255	Right-handed alpha
Helix 24	AC6	B	258	286	Right-handed alpha
Helix 25	AC7	B	287	289	Right-handed 310
Helix 26	AC8	B	314	347	Right-handed alpha
Helix 27	AC9	B	353	361	Right-handed alpha
Helix 28	AD1	B	372	383	Right-handed alpha
Helix 29	AD2	B	383	389	Right-handed alpha
Helix 30	AD3	B	390	394	Right-handed 310
Helix 31	AD4	B	395	408	Right-handed alpha
Helix 32	AD5	C	23	49	Right-handed alpha
Helix 33	AD6	C	102	116	Right-handed alpha
Helix 34	AD7	C	119	146	Right-handed alpha
Helix 35	AD8	C	146	165	Right-handed alpha
Helix 36	AD9	C	167	174	Right-handed alpha
Helix 37	AE1	C	234	255	Right-handed alpha
Helix 38	AE2	C	258	286	Right-handed alpha
Helix 39	AE3	C	287	289	Right-handed 310
Helix 40	AE4	C	314	347	Right-handed alpha
Helix 41	AE5	C	353	361	Right-handed alpha
Helix 42	AE6	C	372	383	Right-handed alpha
Helix 43	AE7	C	384	392	Right-handed alpha
Helix 44	AE8	C	395	408	Right-handed alpha
Helix 45	AE9	D	16	22	Right-handed 310
Helix 46	AF1	D	23	49	Right-handed alpha
Helix 47	AF2	D	102	117	Right-handed alpha
Helix 48	AF3	D	120	146	Right-handed alpha
Helix 49	AF4	D	146	166	Right-handed alpha
Helix 50	AF5	D	167	174	Right-handed alpha
Helix 51	AF6	D	234	255	Right-handed alpha
Helix 52	AF7	D	258	286	Right-handed alpha
Helix 53	AF8	D	287	289	Right-handed 310
Helix 54	AF9	D	314	346	Right-handed alpha
Helix 55	AG1	D	353	361	Right-handed alpha
Helix 56	AG2	D	372	383	Right-handed alpha
Helix 57	AG3	D	384	389	Right-handed alpha
Helix 58	AG4	D	390	394	Right-handed 310
Helix 59	AG5	D	395	408	Right-handed alpha
Helix 60	AG6	E	16	22	Right-handed 310
Helix 61	AG7	E	23	49	Right-handed alpha
Helix 62	AG8	E	102	117	Right-handed alpha
Helix 63	AG9	E	120	146	Right-handed alpha
Helix 64	AH1	E	146	166	Right-handed alpha
Helix 65	AH2	E	168	174	Right-handed alpha
Helix 66	AH3	E	234	255	Right-handed alpha
Helix 67	AH4	E	258	286	Right-handed alpha
Helix 68	AH5	E	287	289	Right-handed 310
Helix 69	AH6	E	314	346	Right-handed alpha
Helix 70	AH7	E	353	361	Right-handed alpha
Helix 71	AH8	E	372	381	Right-handed alpha
Helix 72	AH9	E	384	389	Right-handed alpha
Helix 73	AI1	E	395	408	Right-handed alpha
Helix 74	AI2	F	23	49	Right-handed alpha
Helix 75	AI3	F	102	117	Right-handed alpha
Helix 76	AI4	F	120	146	Right-handed alpha
Helix 77	AI5	F	146	165	Right-handed alpha
Helix 78	AI6	F	167	174	Right-handed alpha
Helix 79	AI7	F	234	255	Right-handed alpha
Helix 80	AI8	F	258	286	Right-handed alpha
Helix 81	AI9	F	287	289	Right-handed 310
Helix 82	AJ1	F	314	346	Right-handed alpha
Helix 83	AJ2	F	353	361	Right-handed alpha
Helix 84	AJ3	F	372	383	Right-handed alpha
Helix 85	AJ4	F	383	389	Right-handed alpha
Helix 86	AJ5	F	395	408	Right-handed alpha

There are 11 sheets in PDB entry 7M19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	307	311	anti-parallel
Strand 3	A	292	296	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	64	65	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	307	311	anti-parallel
Strand 3	B	294	296	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	64	65	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	307	311	anti-parallel
Strand 3	C	292	296	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	64	65	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	308	311	anti-parallel
Strand 3	D	292	295	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	61	first strand
Strand 2	D	64	65	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	56	first strand
Strand 2	E	308	311	anti-parallel
Strand 3	E	292	295	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	64	65	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	56	first strand
Strand 2	F	307	311	anti-parallel
Strand 3	F	292	296	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7M19

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M19