Analysis of interatomic Contacts of Structural Units in PDB entry:
7M1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M1L entry

There are 4 chains in PDB entry 7M1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 14GLN 201
B
 HIS 14PRO 199
C
 HIS 14PRO 199
D
 HIS 14LYS 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 7M1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
38 56Right-handed alpha
Helix 3
AA3
A
70 84Right-handed alpha
Helix 4
AA4
A
98 106Right-handed alpha
Helix 5
AA5
A
107 110Right-handed 310
Helix 6
AA6
A
132 159Right-handed alpha
Helix 7
AA7
A
161 169Right-handed alpha
Helix 8
AA8
A
177 183Right-handed alpha
Helix 9
AA9
A
192 196Right-handed 310
Helix 10
AB1
B
15 28Right-handed alpha
Helix 11
AB2
B
38 56Right-handed alpha
Helix 12
AB3
B
70 84Right-handed alpha
Helix 13
AB4
B
98 106Right-handed alpha
Helix 14
AB5
B
107 110Right-handed 310
Helix 15
AB6
B
135 159Right-handed alpha
Helix 16
AB7
B
161 170Right-handed alpha
Helix 17
AB8
B
177 183Right-handed alpha
Helix 18
AB9
B
192 196Right-handed 310
Helix 19
AC1
C
15 28Right-handed alpha
Helix 20
AC2
C
38 56Right-handed alpha
Helix 21
AC3
C
70 84Right-handed alpha
Helix 22
AC4
C
98 105Right-handed alpha
Helix 23
AC5
C
106 107Right-handed 310
Helix 24
AC6
C
108 110Right-handed 310
Helix 25
AC7
C
132 134Right-handed 310
Helix 26
AC8
C
135 159Right-handed alpha
Helix 27
AC9
C
161 169Right-handed alpha
Helix 28
AD1
C
177 183Right-handed alpha
Helix 29
AD2
C
192 196Right-handed 310
Helix 30
AD3
D
15 28Right-handed alpha
Helix 31
AD4
D
38 56Right-handed alpha
Helix 32
AD5
D
70 84Right-handed alpha
Helix 33
AD6
D
98 106Right-handed alpha
Helix 34
AD7
D
107 110Right-handed 310
Helix 35
AD8
D
136 159Right-handed alpha
Helix 36
AD9
D
161 170Right-handed alpha
Helix 37
AE1
D
177 183Right-handed alpha
Helix 38
AE2
D
192 196Right-handed 310
Helix 39
AE3
E
15 28Right-handed alpha
Helix 40
AE4
E
38 56Right-handed alpha
Helix 41
AE5
E
70 84Right-handed alpha
Helix 42
AE6
E
98 105Right-handed alpha
Helix 43
AE7
E
106 107Right-handed 310
Helix 44
AE8
E
108 110Right-handed 310
Helix 45
AE9
E
135 159Right-handed alpha
Helix 46
AF1
E
161 169Right-handed alpha
Helix 47
AF2
E
177 183Right-handed alpha
Helix 48
AF3
E
192 196Right-handed 310
Helix 49
AF4
F
15 28Right-handed alpha
Helix 50
AF5
F
38 56Right-handed alpha
Helix 51
AF6
F
70 84Right-handed alpha
Helix 52
AF7
F
98 106Right-handed alpha
Helix 53
AF8
F
107 110Right-handed 310
Helix 54
AF9
F
135 159Right-handed alpha
Helix 55
AG1
F
161 169Right-handed alpha
Helix 56
AG2
F
177 183Right-handed alpha
Helix 57
AG3
F
192 196Right-handed 310
Helix 58
AG4
G
15 28Right-handed alpha
Helix 59
AG5
G
38 56Right-handed alpha
Helix 60
AG6
G
70 84Right-handed alpha
Helix 61
AG7
G
98 106Right-handed alpha
Helix 62
AG8
G
107 110Right-handed 310
Helix 63
AG9
G
135 159Right-handed alpha
Helix 64
AH1
G
161 169Right-handed alpha
Helix 65
AH2
G
177 183Right-handed alpha
Helix 66
AH3
G
192 196Right-handed 310
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There are 14 sheets in PDB entry 7M1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
60 66parallel
Strand 3
A
88 97parallel
Strand 4
A
119 122parallel
Strand 5
A
173 176anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
60 66parallel
Strand 3
A
88 97parallel
Strand 4
A
112 114parallel
Strand 5
A
188 189parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
60 66parallel
Strand 3
B
88 97parallel
Strand 4
B
119 122parallel
Strand 5
B
173 176anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
60 66parallel
Strand 3
B
88 97parallel
Strand 4
B
112 114parallel
Strand 5
B
188 189parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
60 66parallel
Strand 3
C
88 97parallel
Strand 4
C
119 121parallel
Strand 5
C
174 176anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
60 66parallel
Strand 3
C
88 97parallel
Strand 4
C
112 114parallel
Strand 5
C
188 189parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 34first strand
Strand 2
D
60 66parallel
Strand 3
D
88 97parallel
Strand 4
D
119 122parallel
Strand 5
D
173 176anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 34first strand
Strand 2
D
60 66parallel
Strand 3
D
88 97parallel
Strand 4
D
112 114parallel
Strand 5
D
188 189parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 34first strand
Strand 2
E
60 66parallel
Strand 3
E
88 97parallel
Strand 4
E
119 121parallel
Strand 5
E
174 176anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 34first strand
Strand 2
E
60 66parallel
Strand 3
E
88 97parallel
Strand 4
E
112 114parallel
Strand 5
E
188 189parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
30 34first strand
Strand 2
F
60 66parallel
Strand 3
F
88 97parallel
Strand 4
F
119 121parallel
Strand 5
F
174 176anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
30 34first strand
Strand 2
F
60 66parallel
Strand 3
F
88 97parallel
Strand 4
F
112 114parallel
Strand 5
F
188 189parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
30 34first strand
Strand 2
G
60 66parallel
Strand 3
G
88 97parallel
Strand 4
G
119 121parallel
Strand 5
G
174 176anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
30 34first strand
Strand 2
G
60 66parallel
Strand 3
G
88 97parallel
Strand 4
G
112 114parallel
Strand 5
G
188 189parallel
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