Analysis of interatomic Contacts of Structural Units in PDB entry:
7M1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M1Q entry

There is 1 chain in PDB entry 7M1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3PHE 2248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 7M1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 22Right-handed alpha
Helix 2
AA2
A
23 45Right-handed alpha
Helix 3
AA3
A
61 64Right-handed 310
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
86 90Right-handed 310
Helix 6
AA6
A
100 113Right-handed alpha
Helix 7
AA7
A
118 138Right-handed alpha
Helix 8
AA8
A
259 264Right-handed 310
Helix 9
AA9
A
271 277Right-handed alpha
Helix 10
AB1
A
279 290Right-handed alpha
Helix 11
AB2
A
290 301Right-handed alpha
Helix 12
AB3
A
312 324Right-handed alpha
Helix 13
AB4
A
338 343Right-handed 310
Helix 14
AB5
A
344 350Right-handed alpha
Helix 15
AB6
A
367 380Right-handed alpha
Helix 16
AB7
A
383 395Right-handed alpha
Helix 17
AB8
A
404 415Right-handed alpha
Helix 18
AB9
A
415 430Right-handed alpha
Helix 19
AC1
A
430 443Right-handed alpha
Helix 20
AC2
A
446 457Right-handed alpha
Helix 21
AC3
A
458 461Right-handed 310
Helix 22
AC4
A
473 478Right-handed 310
Helix 23
AC5
A
498 518Right-handed alpha
Helix 24
AC6
A
536 544Right-handed alpha
Helix 25
AC7
A
574 578Right-handed 310
Helix 26
AC8
A
601 606Right-handed alpha
Helix 27
AC9
A
607 625Right-handed alpha
Helix 28
AD1
A
646 680Right-handed alpha
Helix 29
AD2
A
682 690Right-handed alpha
Helix 30
AD3
A
694 722Right-handed alpha
Helix 31
AD4
A
729 755Right-handed alpha
Helix 32
AD5
A
757 782Right-handed alpha
Helix 33
AD6
A
783 786Right-handed 310
Helix 34
AD7
A
789 795Right-handed alpha
Helix 35
AD8
A
797 815Right-handed alpha
Helix 36
AD9
A
836 861Right-handed alpha
Helix 37
AE1
A
968 978Right-handed alpha
Helix 38
AE2
A
1019 1031Right-handed alpha
Helix 39
AE3
A
1034 1044Right-handed alpha
Helix 40
AE4
A
1063 1074Right-handed alpha
Helix 41
AE5
A
1075 1077Right-handed 310
Helix 42
AE6
A
1093 1107Right-handed alpha
Helix 43
AE7
A
1120 1124Right-handed 310
Helix 44
AE8
A
1143 1149Right-handed alpha
Helix 45
AE9
A
1204 1216Right-handed alpha
Helix 46
AF1
A
1239 1255Right-handed alpha
Helix 47
AF2
A
1268 1277Right-handed alpha
Helix 48
AF3
A
1348 1369Right-handed alpha
Helix 49
AF4
A
1370 1375Right-handed alpha
Helix 50
AF5
A
1378 1394Right-handed alpha
Helix 51
AF6
A
1406 1410Right-handed 310
Helix 52
AF7
A
1424 1436Right-handed alpha
Helix 53
AF8
A
1467 1477Right-handed alpha
Helix 54
AF9
A
1529 1546Right-handed alpha
Helix 55
AG1
A
1573 1587Right-handed alpha
Helix 56
AG2
A
1592 1600Right-handed alpha
Helix 57
AG3
A
1601 1610Right-handed alpha
Helix 58
AG4
A
1626 1642Right-handed alpha
Helix 59
AG5
A
1664 1691Right-handed alpha
Helix 60
AG6
A
1691 1707Right-handed alpha
Helix 61
AG7
A
1708 1717Right-handed alpha
Helix 62
AG8
A
1719 1748Right-handed alpha
Helix 63
AG9
A
1751 1756Right-handed alpha
Helix 64
AH1
A
1759 1779Right-handed alpha
Helix 65
AH2
A
1780 1785Right-handed alpha
Helix 66
AH3
A
1787 1814Right-handed alpha
Helix 67
AH4
A
1820 1830Right-handed alpha
Helix 68
AH5
A
1832 1835Right-handed 310
Helix 69
AH6
A
1836 1861Right-handed alpha
Helix 70
AH7
A
1875 1897Right-handed alpha
Helix 71
AH8
A
1977 1986Right-handed alpha
Helix 72
AH9
A
2033 2041Right-handed alpha
Helix 73
AI1
A
2054 2059Right-handed 310
Helix 74
AI2
A
2072 2085Right-handed alpha
Helix 75
AI3
A
2102 2120Right-handed alpha
Helix 76
AI4
A
2154 2161Right-handed alpha
Helix 77
AI5
A
2179 2193Right-handed alpha
Helix 78
AI6
A
2217 2225Right-handed alpha
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There are 8 sheets in PDB entry 7M1Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
643 644anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
397 400parallel
Strand 3
A
547 552parallel
Strand 4
A
566 572anti-parallel
Strand 5
A
1653 1658parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
631 632first strand
Strand 2
A
1614 1619parallel
Strand 3
A
635 636parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
631 632first strand
Strand 2
A
1614 1619parallel
Strand 3
A
1558 1562anti-parallel
Strand 4
A
1414 1419parallel
Strand 5
A
1521 1524parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
958 960first strand
Strand 2
A
1113 1115parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1156 1158first strand
Strand 2
A
1263 1265anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1968 1969first strand
Strand 2
A
2122 2126parallel
Strand 3
A
2091 2095parallel
Strand 4
A
2016 2020parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2206 2209first strand
Strand 2
A
2166 2169anti-parallel
Strand 3
A
2235 2237anti-parallel
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