Analysis of interatomic Contacts of Structural Units in PDB entry:
7M1S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M1S entry

There is 1 chain in PDB entry 7M1S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3MET 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7M1S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 32Right-handed alpha
Helix 2
AA2
A
50 59Right-handed alpha
Helix 3
AA3
A
110 123Right-handed alpha
Helix 4
AA4
A
135 141Right-handed alpha
Helix 5
AA5
A
142 147Right-handed alpha
Helix 6
AA6
A
148 151Right-handed 310
Helix 7
AA7
A
164 172Right-handed 310
Helix 8
AA8
A
195 204Right-handed alpha
Helix 9
AA9
A
211 228Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
247 251Right-handed 310
Helix 12
AB3
A
252 256Right-handed 310
Helix 13
AB4
A
257 275Right-handed alpha
Helix 14
AB5
A
287 304Right-handed alpha
Helix 15
AB6
A
309 339Right-handed alpha
Helix 16
AB7
A
347 369Right-handed alpha
Helix 17
AB8
A
373 375Right-handed 310
Helix 18
AB9
A
376 423Right-handed alpha
Helix 19
AC1
A
429 448Right-handed alpha
Helix 20
AC2
A
454 466Right-handed alpha
Helix 21
AC3
A
466 477Right-handed alpha
Helix 22
AC4
A
481 561Right-handed alpha
Helix 23
AC5
A
563 579Right-handed alpha
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There are 2 sheets in PDB entry 7M1S. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
78 84anti-parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
38 45parallel
Strand 5
A
125 131parallel
Strand 6
A
175 181parallel
Strand 7
A
231 235parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
284 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il