Analysis of interatomic Contacts of Structural Units in PDB entry:
7M1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M1X entry

There are 10 chains in PDB entry 7M1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 A -73 G 62
J
 C -62 T 73
A
 TYR 441ALA 535
B
 ARG 23GLY 102
C
 ALA 816ILE 918
D
 LYS 1228LYS 1322
E
 HIS 639ALA 735
F
 ARG 217GLY 302
G
 ALA 1016ILE 1110
H
 LYS 1428LYS 1522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7M1X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
445 457Right-handed alpha
Helix 2
AA2
A
463 479Right-handed alpha
Helix 3
AA3
A
485 514Right-handed alpha
Helix 4
AA4
A
520 532Right-handed alpha
Helix 5
AA5
B
24 29Right-handed 310
Helix 6
AA6
B
30 42Right-handed alpha
Helix 7
AA7
B
49 76Right-handed alpha
Helix 8
AA8
B
82 93Right-handed alpha
Helix 9
AA9
C
818 824Right-handed alpha
Helix 10
AB1
C
828 838Right-handed alpha
Helix 11
AB2
C
847 875Right-handed alpha
Helix 12
AB3
C
882 893Right-handed alpha
Helix 13
AB4
C
894 900Right-handed alpha
Helix 14
AB5
D
1234 1246Right-handed alpha
Helix 15
AB6
D
1252 1281Right-handed alpha
Helix 16
AB7
D
1287 1299Right-handed alpha
Helix 17
AB8
D
1300 1320Right-handed alpha
Helix 18
AB9
E
644 657Right-handed alpha
Helix 19
AC1
E
663 679Right-handed alpha
Helix 20
AC2
E
685 714Right-handed alpha
Helix 21
AC3
E
720 732Right-handed alpha
Helix 22
AC4
F
224 229Right-handed 310
Helix 23
AC5
F
230 242Right-handed alpha
Helix 24
AC6
F
249 276Right-handed alpha
Helix 25
AC7
F
282 293Right-handed alpha
Helix 26
AC8
G
1018 1023Right-handed alpha
Helix 27
AC9
G
1028 1039Right-handed alpha
Helix 28
AD1
G
1047 1077Right-handed alpha
Helix 29
AD2
G
1082 1093Right-handed alpha
Helix 30
AD3
G
1093 1100Right-handed alpha
Helix 31
AD4
H
1434 1446Right-handed alpha
Helix 32
AD5
H
1452 1481Right-handed alpha
Helix 33
AD6
H
1487 1499Right-handed alpha
Helix 34
AD7
H
1500 1520Right-handed alpha
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There are 7 sheets in PDB entry 7M1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 484first strand
Strand 2
B
80 81parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
845 846first strand
Strand 2
D
1285 1286parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
880 881first strand
Strand 2
D
1250 1251parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
683 684first strand
Strand 2
F
280 281parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
718 719first strand
Strand 2
F
245 246parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1045 1046first strand
Strand 2
H
1485 1486parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1080 1081first strand
Strand 2
H
1450 1451parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il