Analysis of interatomic Contacts of Structural Units in PDB entry:
7M2X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M2X entry

There are 5 chains in PDB entry 7M2X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	ASP 453
B	MET 1	ASP 453
C	MET 1	PRO 814
D	SER 163	ARG 846
U	ASP 112	GLY 144

There are108 helices in PDB entry 7M2X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	29	Right-handed alpha
Helix 2	AA2	A	72	81	Right-handed alpha
Helix 3	AA3	A	88	90	Right-handed 310
Helix 4	AA4	A	104	115	Right-handed alpha
Helix 5	AA5	A	115	128	Right-handed alpha
Helix 6	AA6	A	144	162	Right-handed alpha
Helix 7	AA7	A	179	198	Right-handed alpha
Helix 8	AA8	A	206	217	Right-handed alpha
Helix 9	AA9	A	227	239	Right-handed alpha
Helix 10	AB1	A	239	244	Right-handed alpha
Helix 11	AB2	A	251	257	Right-handed alpha
Helix 12	AB3	A	290	299	Right-handed alpha
Helix 13	AB4	A	300	304	Right-handed 310
Helix 14	AB5	A	327	339	Right-handed alpha
Helix 15	AB6	A	365	369	Right-handed 310
Helix 16	AB7	A	382	386	Right-handed 310
Helix 17	AB8	A	387	398	Right-handed alpha
Helix 18	AB9	A	401	406	Right-handed alpha
Helix 19	AC1	A	409	415	Right-handed 310
Helix 20	AC2	A	416	440	Right-handed alpha
Helix 21	AC3	A	443	451	Right-handed alpha
Helix 22	AC4	B	11	29	Right-handed alpha
Helix 23	AC5	B	72	83	Right-handed alpha
Helix 24	AC6	B	88	90	Right-handed 310
Helix 25	AC7	B	103	115	Right-handed alpha
Helix 26	AC8	B	115	128	Right-handed alpha
Helix 27	AC9	B	144	162	Right-handed alpha
Helix 28	AD1	B	179	198	Right-handed alpha
Helix 29	AD2	B	206	217	Right-handed alpha
Helix 30	AD3	B	223	239	Right-handed alpha
Helix 31	AD4	B	239	244	Right-handed alpha
Helix 32	AD5	B	251	260	Right-handed alpha
Helix 33	AD6	B	290	299	Right-handed alpha
Helix 34	AD7	B	300	304	Right-handed 310
Helix 35	AD8	B	327	342	Right-handed alpha
Helix 36	AD9	B	367	371	Right-handed 310
Helix 37	AE1	B	383	401	Right-handed alpha
Helix 38	AE2	B	418	440	Right-handed alpha
Helix 39	AE3	B	446	451	Right-handed alpha
Helix 40	AE4	C	42	47	Right-handed 310
Helix 41	AE5	C	51	68	Right-handed alpha
Helix 42	AE6	C	99	126	Right-handed alpha
Helix 43	AE7	C	127	131	Right-handed 310
Helix 44	AE8	C	132	149	Right-handed alpha
Helix 45	AE9	C	149	165	Right-handed alpha
Helix 46	AF1	C	169	180	Right-handed alpha
Helix 47	AF2	C	181	206	Right-handed alpha
Helix 48	AF3	C	244	256	Right-handed alpha
Helix 49	AF4	C	261	274	Right-handed alpha
Helix 50	AF5	C	276	290	Right-handed alpha
Helix 51	AF6	C	329	331	Right-handed 310
Helix 52	AF7	C	337	362	Right-handed alpha
Helix 53	AF8	C	367	371	Right-handed 310
Helix 54	AF9	C	380	385	Right-handed alpha
Helix 55	AG1	C	388	412	Right-handed alpha
Helix 56	AG2	C	414	427	Right-handed alpha
Helix 57	AG3	C	431	442	Right-handed alpha
Helix 58	AG4	C	443	446	Right-handed 310
Helix 59	AG5	C	458	470	Right-handed alpha
Helix 60	AG6	C	476	481	Right-handed alpha
Helix 61	AG7	C	490	499	Right-handed alpha
Helix 62	AG8	C	569	573	Right-handed 310
Helix 63	AG9	C	575	609	Right-handed alpha
Helix 64	AH1	C	618	623	Right-handed alpha
Helix 65	AH2	C	625	651	Right-handed alpha
Helix 66	AH3	C	651	664	Right-handed alpha
Helix 67	AH4	C	668	685	Right-handed alpha
Helix 68	AH5	C	686	691	Right-handed alpha
Helix 69	AH6	C	692	710	Right-handed alpha
Helix 70	AH7	C	711	717	Right-handed alpha
Helix 71	AH8	C	718	720	Right-handed 310
Helix 72	AH9	C	721	726	Right-handed alpha
Helix 73	AI1	C	754	788	Right-handed alpha
Helix 74	AI2	C	802	812	Right-handed alpha
Helix 75	AI3	D	166	172	Right-handed alpha
Helix 76	AI4	D	173	175	Right-handed 310
Helix 77	AI5	D	180	192	Right-handed alpha
Helix 78	AI6	D	214	243	Right-handed alpha
Helix 79	AI7	D	247	275	Right-handed alpha
Helix 80	AI8	D	279	301	Right-handed alpha
Helix 81	AI9	D	302	304	Right-handed 310
Helix 82	AJ1	D	308	320	Right-handed alpha
Helix 83	AJ2	D	324	353	Right-handed alpha
Helix 84	AJ3	D	387	390	Right-handed 310
Helix 85	AJ4	D	395	415	Right-handed alpha
Helix 86	AJ5	D	418	436	Right-handed alpha
Helix 87	AJ6	D	437	440	Right-handed 310
Helix 88	AJ7	D	443	465	Right-handed alpha
Helix 89	AJ8	D	469	481	Right-handed alpha
Helix 90	AJ9	D	485	496	Right-handed alpha
Helix 91	AK1	D	496	502	Right-handed alpha
Helix 92	AK2	D	503	507	Right-handed 310
Helix 93	AK3	D	508	509	Right-handed 310
Helix 94	AK4	D	510	522	Right-handed alpha
Helix 95	AK5	D	525	530	Right-handed alpha
Helix 96	AK6	D	534	539	Right-handed alpha
Helix 97	AK7	D	553	558	Right-handed alpha
Helix 98	AK8	D	581	612	Right-handed alpha
Helix 99	AK9	D	615	623	Right-handed 310
Helix 100	AL1	D	624	656	Right-handed alpha
Helix 101	AL2	D	656	669	Right-handed alpha
Helix 102	AL3	D	670	673	Right-handed 310
Helix 103	AL4	D	720	736	Right-handed alpha
Helix 104	AL5	D	737	742	Right-handed 310
Helix 105	AL6	D	757	793	Right-handed alpha
Helix 106	AL7	D	798	832	Right-handed alpha
Helix 107	AL8	D	835	845	Right-handed alpha
Helix 108	AL9	U	118	142	Right-handed alpha

There are 11 sheets in PDB entry 7M2X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	66	70	parallel
Strand 3	A	4	10	parallel
Strand 4	A	133	141	parallel
Strand 5	A	166	173	parallel
Strand 6	A	201	205	parallel
Strand 7	A	267	273	parallel
Strand 8	A	373	380	anti-parallel
Strand 9	A	315	323	anti-parallel
Strand 10	A	353	357	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	56	first strand
Strand 2	A	62	64	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	66	70	parallel
Strand 3	B	4	9	parallel
Strand 4	B	133	139	parallel
Strand 5	B	167	173	parallel
Strand 6	B	200	205	parallel
Strand 7	B	267	273	parallel
Strand 8	B	374	378	anti-parallel
Strand 9	B	318	321	anti-parallel
Strand 10	B	352	355	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	56	first strand
Strand 2	B	62	64	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	10	first strand
Strand 2	D	207	208	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	77	first strand
Strand 2	C	92	94	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	235	first strand
Strand 2	C	324	327	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	482	486	first strand
Strand 2	C	560	564	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	366	first strand
Strand 2	D	383	385	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	541	542	first strand
Strand 2	D	561	562	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	683	first strand
Strand 2	D	689	691	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7M2X

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M2X