Analysis of interatomic Contacts of Structural Units in PDB entry:
7M3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M3H entry

There are 2 chains in PDB entry 7M3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 13	ARG 421
B	ARG 13	LYS 422

There are 37 helices in PDB entry 7M3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	18	29	Right-handed alpha
Helix 3	AA3	A	33	42	Right-handed alpha
Helix 4	AA4	A	46	54	Right-handed alpha
Helix 5	AA5	A	88	101	Right-handed alpha
Helix 6	AA6	A	123	133	Right-handed alpha
Helix 7	AA7	A	134	146	Right-handed alpha
Helix 8	AA8	A	146	152	Right-handed alpha
Helix 9	AA9	A	182	201	Right-handed alpha
Helix 10	AB1	A	229	232	Right-handed 310
Helix 11	AB2	A	236	252	Right-handed alpha
Helix 12	AB3	A	254	276	Right-handed alpha
Helix 13	AB4	A	279	291	Right-handed alpha
Helix 14	AB5	A	330	341	Right-handed alpha
Helix 15	AB6	A	344	369	Right-handed alpha
Helix 16	AB7	A	371	388	Right-handed alpha
Helix 17	AB8	A	392	403	Right-handed alpha
Helix 18	AB9	A	409	421	Right-handed alpha
Helix 19	AC1	B	13	17	Right-handed 310
Helix 20	AC2	B	18	29	Right-handed alpha
Helix 21	AC3	B	33	42	Right-handed alpha
Helix 22	AC4	B	46	54	Right-handed alpha
Helix 23	AC5	B	88	101	Right-handed alpha
Helix 24	AC6	B	123	133	Right-handed alpha
Helix 25	AC7	B	134	146	Right-handed alpha
Helix 26	AC8	B	146	152	Right-handed alpha
Helix 27	AC9	B	165	167	Right-handed 310
Helix 28	AD1	B	182	201	Right-handed alpha
Helix 29	AD2	B	229	232	Right-handed 310
Helix 30	AD3	B	236	252	Right-handed alpha
Helix 31	AD4	B	254	276	Right-handed alpha
Helix 32	AD5	B	279	291	Right-handed alpha
Helix 33	AD6	B	330	341	Right-handed alpha
Helix 34	AD7	B	344	369	Right-handed alpha
Helix 35	AD8	B	371	388	Right-handed alpha
Helix 36	AD9	B	393	403	Right-handed alpha
Helix 37	AE1	B	409	422	Right-handed alpha

There are 8 sheets in PDB entry 7M3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	83	first strand
Strand 2	A	57	73	anti-parallel
Strand 3	B	57	68	anti-parallel
Strand 4	B	80	83	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	108	first strand
Strand 2	A	219	227	anti-parallel
Strand 3	A	309	317	anti-parallel
Strand 4	A	301	306	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	164	first strand
Strand 2	A	168	176	anti-parallel
Strand 3	A	112	119	anti-parallel
Strand 4	A	205	212	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	293	first strand
Strand 2	A	296	297	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	73	first strand
Strand 2	B	76	77	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	108	first strand
Strand 2	B	219	227	anti-parallel
Strand 3	B	309	317	anti-parallel
Strand 4	B	301	306	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	163	first strand
Strand 2	B	169	176	anti-parallel
Strand 3	B	112	119	anti-parallel
Strand 4	B	205	212	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	292	293	first strand
Strand 2	B	296	297	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7M3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M3H