Analysis of interatomic Contacts of Structural Units in PDB entry:
7M3K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M3K entry

There is 1 chain in PDB entry 7M3K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11PRO 597
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7M3K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 19Right-handed alpha
Helix 2
AA2
A
23 35Right-handed alpha
Helix 3
AA3
A
40 45Right-handed alpha
Helix 4
AA4
A
66 82Right-handed alpha
Helix 5
AA5
A
101 104Right-handed 310
Helix 6
AA6
A
105 120Right-handed alpha
Helix 7
AA7
A
133 146Right-handed alpha
Helix 8
AA8
A
170 181Right-handed alpha
Helix 9
AA9
A
188 196Right-handed alpha
Helix 10
AB1
A
208 220Right-handed alpha
Helix 11
AB2
A
234 255Right-handed alpha
Helix 12
AB3
A
257 262Right-handed alpha
Helix 13
AB4
A
263 278Right-handed alpha
Helix 14
AB5
A
282 295Right-handed alpha
Helix 15
AB6
A
299 308Right-handed alpha
Helix 16
AB7
A
323 331Right-handed alpha
Helix 17
AB8
A
331 342Right-handed alpha
Helix 18
AB9
A
357 363Right-handed alpha
Helix 19
AC1
A
402 404Right-handed 310
Helix 20
AC2
A
405 413Right-handed alpha
Helix 21
AC3
A
431 439Right-handed alpha
Helix 22
AC4
A
441 445Right-handed 310
Helix 23
AC5
A
474 479Right-handed alpha
Helix 24
AC6
A
508 512Right-handed 310
Helix 25
AC7
A
513 518Right-handed 310
Helix 26
AC8
A
538 552Right-handed alpha
Helix 27
AC9
A
562 570Right-handed alpha
Helix 28
AD1
A
574 578Right-handed 310
Helix 29
AD2
A
581 585Right-handed 310
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There are 4 sheets in PDB entry 7M3K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
50 55parallel
Strand 3
A
124 129parallel
Strand 4
A
149 153parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
165 167anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 391first strand
Strand 2
A
394 400anti-parallel
Strand 3
A
502 506anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 489first strand
Strand 2
A
450 455parallel
Strand 3
A
421 430parallel
Strand 4
A
523 527anti-parallel
Strand 5
A
532 535anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il