Analysis of interatomic Contacts of Structural Units in PDB entry:
7M3Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M3Q entry

There are 2 chains in PDB entry 7M3Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 369THR 742
B
 MET 1ARG 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7M3Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
369 387Right-handed alpha
Helix 2
AA2
A
401 413Right-handed alpha
Helix 3
AA3
A
414 419Right-handed alpha
Helix 4
AA4
A
433 451Right-handed alpha
Helix 5
AA5
A
452 455Right-handed 310
Helix 6
AA6
A
471 476Right-handed 310
Helix 7
AA7
A
478 496Right-handed alpha
Helix 8
AA8
A
505 513Right-handed alpha
Helix 9
AA9
A
521 526Right-handed alpha
Helix 10
AB1
A
526 539Right-handed alpha
Helix 11
AB2
A
567 571Right-handed 310
Helix 12
AB3
A
577 592Right-handed alpha
Helix 13
AB4
A
594 609Right-handed alpha
Helix 14
AB5
A
610 615Right-handed 310
Helix 15
AB6
A
618 628Right-handed alpha
Helix 16
AB7
A
633 640Right-handed alpha
Helix 17
AB8
A
650 663Right-handed alpha
Helix 18
AB9
A
664 677Right-handed alpha
Helix 19
AC1
A
685 689Right-handed 310
Helix 20
AC2
A
727 739Right-handed alpha
Helix 21
AC3
B
22 34Right-handed alpha
Helix 22
AC4
B
37 39Right-handed 310
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There are 5 sheets in PDB entry 7M3Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 397first strand
Strand 2
A
421 426parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 459first strand
Strand 2
A
467 469anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 554first strand
Strand 2
A
559 563anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 644first strand
Strand 2
A
698 702parallel
Strand 3
A
719 722parallel
Strand 4
A
712 714anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 44anti-parallel
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