Analysis of interatomic Contacts of Structural Units in PDB entry:
7M3W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M3W entry

There are 3 chains in PDB entry 7M3W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3THR 268
B
 PRO 2THR 268
C
 PRO 2THR 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7M3W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 13Right-handed 310
Helix 2
AA2
A
32 36Right-handed alpha
Helix 3
AA3
A
39 49Right-handed alpha
Helix 4
AA4
A
49 55Right-handed alpha
Helix 5
AA5
A
76 86Right-handed alpha
Helix 6
AA6
A
86 106Right-handed alpha
Helix 7
AA7
A
121 130Right-handed alpha
Helix 8
AA8
A
144 149Right-handed alpha
Helix 9
AA9
A
155 160Right-handed alpha
Helix 10
AB1
A
160 165Right-handed alpha
Helix 11
AB2
A
165 176Right-handed alpha
Helix 12
AB3
A
181 188Right-handed alpha
Helix 13
AB4
A
195 197Right-handed 310
Helix 14
AB5
A
198 212Right-handed alpha
Helix 15
AB6
A
214 226Right-handed alpha
Helix 16
AB7
A
226 231Right-handed alpha
Helix 17
AB8
A
232 247Right-handed alpha
Helix 18
AB9
A
249 261Right-handed alpha
Helix 19
AC1
B
9 13Right-handed 310
Helix 20
AC2
B
32 36Right-handed alpha
Helix 21
AC3
B
39 55Right-handed alpha
Helix 22
AC4
B
76 86Right-handed alpha
Helix 23
AC5
B
86 106Right-handed alpha
Helix 24
AC6
B
121 130Right-handed alpha
Helix 25
AC7
B
144 149Right-handed alpha
Helix 26
AC8
B
155 165Right-handed alpha
Helix 27
AC9
B
165 176Right-handed alpha
Helix 28
AD1
B
181 188Right-handed alpha
Helix 29
AD2
B
195 197Right-handed 310
Helix 30
AD3
B
198 212Right-handed alpha
Helix 31
AD4
B
214 231Right-handed alpha
Helix 32
AD5
B
232 247Right-handed alpha
Helix 33
AD6
B
249 261Right-handed alpha
Helix 34
AD7
C
9 13Right-handed 310
Helix 35
AD8
C
32 36Right-handed alpha
Helix 36
AD9
C
39 55Right-handed alpha
Helix 37
AE1
C
76 86Right-handed alpha
Helix 38
AE2
C
86 106Right-handed alpha
Helix 39
AE3
C
121 130Right-handed alpha
Helix 40
AE4
C
144 149Right-handed alpha
Helix 41
AE5
C
155 165Right-handed alpha
Helix 42
AE6
C
165 176Right-handed alpha
Helix 43
AE7
C
181 187Right-handed alpha
Helix 44
AE8
C
195 197Right-handed 310
Helix 45
AE9
C
198 212Right-handed alpha
Helix 46
AF1
C
214 231Right-handed alpha
Helix 47
AF2
C
232 247Right-handed alpha
Helix 48
AF3
C
249 261Right-handed alpha
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There are 9 sheets in PDB entry 7M3W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
25 30anti-parallel
Strand 3
A
61 66parallel
Strand 4
A
111 115parallel
Strand 5
A
132 136parallel
Strand 6
A
192 194parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
74 75parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
140 142parallel
Strand 3
A
179 180anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 20first strand
Strand 2
B
25 30anti-parallel
Strand 3
B
61 66parallel
Strand 4
B
111 115parallel
Strand 5
B
132 136parallel
Strand 6
B
192 194parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
74 75parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
140 142parallel
Strand 3
B
179 180anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 20first strand
Strand 2
C
25 30anti-parallel
Strand 3
C
61 66parallel
Strand 4
C
111 115parallel
Strand 5
C
132 136parallel
Strand 6
C
192 194parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 38first strand
Strand 2
C
74 75parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 120first strand
Strand 2
C
140 142parallel
Strand 3
C
179 180anti-parallel
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