Analysis of interatomic Contacts of Structural Units in PDB entry:
7M5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M5B entry

There are 4 chains in PDB entry 7M5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21ASN 185
B
 GLU 80CYS 104
C
 SER 21ASN 185
D
 ASP 81CYS 104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7M5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 48Right-handed alpha
Helix 2
AA2
A
69 82Right-handed alpha
Helix 3
AA3
A
82 89Right-handed alpha
Helix 4
AA4
A
89 101Right-handed alpha
Helix 5
AA5
A
106 120Right-handed alpha
Helix 6
AA6
A
124 145Right-handed alpha
Helix 7
AA7
A
150 165Right-handed alpha
Helix 8
AA8
A
166 174Right-handed alpha
Helix 9
AA9
A
175 181Right-handed 310
Helix 10
AB1
B
81 101Right-handed alpha
Helix 11
AB2
C
23 48Right-handed alpha
Helix 12
AB3
C
57 62Right-handed alpha
Helix 13
AB4
C
69 82Right-handed alpha
Helix 14
AB5
C
82 101Right-handed alpha
Helix 15
AB6
C
106 120Right-handed alpha
Helix 16
AB7
C
124 145Right-handed alpha
Helix 17
AB8
C
150 165Right-handed alpha
Helix 18
AB9
C
166 174Right-handed alpha
Helix 19
AC1
C
175 183Right-handed 310
Helix 20
AC2
D
82 101Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7M5B.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
B
102 103anti-parallel
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