Analysis of interatomic Contacts of Structural Units in PDB entry:
7M7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M7A entry

There are 2 chains in PDB entry 7M7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2VAL 577
B
 GLY 2THR 93
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are125 helices in PDB entry 7M7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 13Right-handed 310
Helix 2
AA2
A
49 53Right-handed 310
Helix 3
AA3
A
55 74Right-handed alpha
Helix 4
AA4
A
75 77Right-handed 310
Helix 5
AA5
A
114 122Right-handed alpha
Helix 6
AA6
A
124 131Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
149 153Right-handed 310
Helix 9
AA9
A
165 170Right-handed alpha
Helix 10
AB1
A
171 173Right-handed 310
Helix 11
AB2
A
189 195Right-handed alpha
Helix 12
AB3
A
240 245Right-handed alpha
Helix 13
AB4
A
246 248Right-handed 310
Helix 14
AB5
A
249 266Right-handed alpha
Helix 15
AB6
A
268 281Right-handed alpha
Helix 16
AB7
A
286 293Right-handed 310
Helix 17
AB8
A
294 305Right-handed alpha
Helix 18
AB9
A
312 316Right-handed 310
Helix 19
AC1
A
317 339Right-handed alpha
Helix 20
AC2
A
354 362Right-handed alpha
Helix 21
AC3
A
363 380Right-handed alpha
Helix 22
AC4
A
385 389Right-handed 310
Helix 23
AC5
A
391 407Right-handed alpha
Helix 24
AC6
A
407 430Right-handed alpha
Helix 25
AC7
A
451 456Right-handed 310
Helix 26
AC8
A
463 468Right-handed alpha
Helix 27
AC9
A
469 471Right-handed 310
Helix 28
AD1
A
478 502Right-handed alpha
Helix 29
AD2
A
504 508Right-handed 310
Helix 30
AD3
A
509 535Right-handed alpha
Helix 31
AD4
A
539 559Right-handed alpha
Helix 32
AD5
A
560 565Right-handed alpha
Helix 33
AD6
A
568 575Right-handed alpha
Helix 34
AD7
B
11 13Right-handed 310
Helix 35
AD8
B
55 74Right-handed alpha
Helix 36
AD9
B
75 77Right-handed 310
Helix 37
AE1
B
114 122Right-handed alpha
Helix 38
AE2
B
124 131Right-handed alpha
Helix 39
AE3
B
133 143Right-handed alpha
Helix 40
AE4
B
149 151Right-handed 310
Helix 41
AE5
B
165 170Right-handed alpha
Helix 42
AE6
B
189 195Right-handed alpha
Helix 43
AE7
B
240 245Right-handed alpha
Helix 44
AE8
B
246 248Right-handed 310
Helix 45
AE9
B
249 266Right-handed alpha
Helix 46
AF1
B
268 281Right-handed alpha
Helix 47
AF2
B
286 288Right-handed 310
Helix 48
AF3
B
289 294Right-handed alpha
Helix 49
AF4
B
294 305Right-handed alpha
Helix 50
AF5
B
317 338Right-handed alpha
Helix 51
AF6
B
354 362Right-handed alpha
Helix 52
AF7
B
363 380Right-handed alpha
Helix 53
AF8
B
385 389Right-handed 310
Helix 54
AF9
B
391 407Right-handed alpha
Helix 55
AG1
B
407 428Right-handed alpha
Helix 56
AG2
B
451 456Right-handed 310
Helix 57
AG3
B
463 468Right-handed alpha
Helix 58
AG4
B
469 471Right-handed 310
Helix 59
AG5
B
477 502Right-handed alpha
Helix 60
AG6
B
504 508Right-handed 310
Helix 61
AG7
B
509 535Right-handed alpha
Helix 62
AG8
B
539 559Right-handed alpha
Helix 63
AG9
B
560 565Right-handed alpha
Helix 64
AH1
B
568 578Right-handed alpha
Helix 65
AH2
C
11 13Right-handed 310
Helix 66
AH3
C
55 74Right-handed alpha
Helix 67
AH4
C
75 77Right-handed 310
Helix 68
AH5
C
124 131Right-handed alpha
Helix 69
AH6
C
133 143Right-handed alpha
Helix 70
AH7
C
149 153Right-handed 310
Helix 71
AH8
C
165 170Right-handed alpha
Helix 72
AH9
C
171 173Right-handed 310
Helix 73
AI1
C
189 195Right-handed alpha
Helix 74
AI2
C
240 245Right-handed alpha
Helix 75
AI3
C
246 248Right-handed 310
Helix 76
AI4
C
249 266Right-handed alpha
Helix 77
AI5
C
268 281Right-handed alpha
Helix 78
AI6
C
286 293Right-handed 310
Helix 79
AI7
C
294 305Right-handed alpha
Helix 80
AI8
C
312 316Right-handed 310
Helix 81
AI9
C
317 339Right-handed alpha
Helix 82
AJ1
C
354 362Right-handed alpha
Helix 83
AJ2
C
363 379Right-handed alpha
Helix 84
AJ3
C
385 389Right-handed 310
Helix 85
AJ4
C
391 407Right-handed alpha
Helix 86
AJ5
C
407 428Right-handed alpha
Helix 87
AJ6
C
451 456Right-handed 310
Helix 88
AJ7
C
463 468Right-handed alpha
Helix 89
AJ8
C
469 471Right-handed 310
Helix 90
AJ9
C
478 502Right-handed alpha
Helix 91
AK1
C
504 508Right-handed 310
Helix 92
AK2
C
509 535Right-handed alpha
Helix 93
AK3
C
539 559Right-handed alpha
Helix 94
AK4
C
560 566Right-handed alpha
Helix 95
AK5
C
570 578Right-handed alpha
Helix 96
AK6
D
11 13Right-handed 310
Helix 97
AK7
D
55 73Right-handed alpha
Helix 98
AK8
D
114 122Right-handed alpha
Helix 99
AK9
D
124 131Right-handed alpha
Helix 100
AL1
D
133 143Right-handed alpha
Helix 101
AL2
D
149 153Right-handed 310
Helix 102
AL3
D
165 170Right-handed alpha
Helix 103
AL4
D
171 173Right-handed 310
Helix 104
AL5
D
189 195Right-handed alpha
Helix 105
AL6
D
240 245Right-handed alpha
Helix 106
AL7
D
246 248Right-handed 310
Helix 107
AL8
D
249 266Right-handed alpha
Helix 108
AL9
D
268 281Right-handed alpha
Helix 109
AM1
D
286 293Right-handed 310
Helix 110
AM2
D
294 305Right-handed alpha
Helix 111
AM3
D
317 339Right-handed alpha
Helix 112
AM4
D
354 362Right-handed alpha
Helix 113
AM5
D
363 379Right-handed alpha
Helix 114
AM6
D
385 389Right-handed 310
Helix 115
AM7
D
391 407Right-handed alpha
Helix 116
AM8
D
407 428Right-handed alpha
Helix 117
AM9
D
451 456Right-handed 310
Helix 118
AN1
D
463 468Right-handed alpha
Helix 119
AN2
D
469 471Right-handed 310
Helix 120
AN3
D
478 502Right-handed alpha
Helix 121
AN4
D
504 508Right-handed 310
Helix 122
AN5
D
509 535Right-handed alpha
Helix 123
AN6
D
539 559Right-handed alpha
Helix 124
AN7
D
560 565Right-handed alpha
Helix 125
AN8
D
568 575Right-handed alpha
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There are 5 sheets in PDB entry 7M7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
82 84parallel
Strand 3
A
90 96anti-parallel
Strand 4
A
39 47anti-parallel
Strand 5
A
29 36anti-parallel
Strand 6
A
14 15anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
82 84parallel
Strand 3
B
90 93anti-parallel
Strand 4
B
39 47anti-parallel
Strand 5
B
30 36anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 154first strand
Strand 2
B
157 158anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
82 84parallel
Strand 3
C
90 96anti-parallel
Strand 4
C
39 47anti-parallel
Strand 5
C
29 36anti-parallel
Strand 6
C
14 15anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 9first strand
Strand 2
D
82 84parallel
Strand 3
D
90 93anti-parallel
Strand 4
D
39 47anti-parallel
Strand 5
D
30 36anti-parallel
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