Analysis of interatomic Contacts of Structural Units in PDB entry:
7M7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M7C entry

There are 2 chains in PDB entry 7M7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 50TYR 227
A
 TYR 229CYS 520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7M7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 126Right-handed alpha
Helix 2
AA2
A
127 133Right-handed alpha
Helix 3
AA3
A
155 165Right-handed alpha
Helix 4
AA4
A
171 200Right-handed alpha
Helix 5
AA5
A
202 217Right-handed alpha
Helix 6
AA6
A
229 241Right-handed alpha
Helix 7
AA7
A
259 284Right-handed alpha
Helix 8
AA8
A
293 295Right-handed 310
Helix 9
AA9
A
296 306Right-handed alpha
Helix 10
AB1
A
307 309Right-handed 310
Helix 11
AB2
A
329 341Right-handed alpha
Helix 12
AB3
A
342 345Right-handed 310
Helix 13
AB4
A
346 359Right-handed alpha
Helix 14
AB5
A
362 374Right-handed alpha
Helix 15
AB6
A
383 396Right-handed alpha
Helix 16
AB7
A
401 416Right-handed alpha
Helix 17
AB8
A
417 420Right-handed 310
Helix 18
AB9
A
431 436Right-handed 310
Helix 19
AC1
A
467 479Right-handed alpha
Helix 20
AC2
A
497 511Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7M7C.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
69 76anti-parallel
Strand 3
A
86 94anti-parallel
Strand 4
A
134 139anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
222 227parallel
Strand 7
A
245 251parallel
Strand 8
A
456 460parallel
Strand 9
A
481 485parallel
Strand 10
A
519 520parallel
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