Analysis of interatomic Contacts of Structural Units in PDB entry:
7M7I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M7I entry

There are 6 chains in PDB entry 7M7I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	GLY 1490
A	MET 1	ARG 1390
C	GLU 3	PRO 220
D	ASP 17	PHE 231
E	GLU 3	PRO 220
F	ASP 17	PHE 231

There are 98 helices in PDB entry 7M7I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	8	32	Right-handed alpha
Helix 2	AA2	B	54	59	Right-handed alpha
Helix 3	AA3	B	112	119	Right-handed alpha
Helix 4	AA4	B	120	137	Right-handed alpha
Helix 5	AA5	B	174	179	Right-handed alpha
Helix 6	AA6	B	182	192	Right-handed alpha
Helix 7	AA7	B	203	205	Right-handed 310
Helix 8	AA8	B	206	220	Right-handed alpha
Helix 9	AA9	B	238	247	Right-handed alpha
Helix 10	AB1	B	280	286	Right-handed alpha
Helix 11	AB2	B	312	328	Right-handed alpha
Helix 12	AB3	B	346	359	Right-handed alpha
Helix 13	AB4	B	371	376	Right-handed alpha
Helix 14	AB5	B	379	383	Right-handed 310
Helix 15	AB6	B	385	398	Right-handed alpha
Helix 16	AB7	B	481	499	Right-handed alpha
Helix 17	AB8	B	503	513	Right-handed alpha
Helix 18	AB9	B	528	533	Right-handed alpha
Helix 19	AC1	B	534	540	Right-handed alpha
Helix 20	AC2	B	572	580	Right-handed alpha
Helix 21	AC3	B	585	595	Right-handed alpha
Helix 22	AC4	B	601	607	Right-handed alpha
Helix 23	AC5	B	611	616	Right-handed alpha
Helix 24	AC6	B	623	645	Right-handed alpha
Helix 25	AC7	B	657	666	Right-handed alpha
Helix 26	AC8	B	670	684	Right-handed alpha
Helix 27	AC9	B	700	708	Right-handed alpha
Helix 28	AD1	B	731	740	Right-handed alpha
Helix 29	AD2	B	759	762	Right-handed 310
Helix 30	AD3	B	763	770	Right-handed alpha
Helix 31	AD4	B	799	807	Right-handed alpha
Helix 32	AD5	B	812	823	Right-handed alpha
Helix 33	AD6	B	837	847	Right-handed alpha
Helix 34	AD7	B	864	878	Right-handed alpha
Helix 35	AD8	B	883	888	Right-handed alpha
Helix 36	AD9	B	1409	1428	Right-handed alpha
Helix 37	AE1	B	1448	1463	Right-handed alpha
Helix 38	AE2	B	1470	1475	Right-handed alpha
Helix 39	AE3	B	1477	1488	Right-handed alpha
Helix 40	AE4	A	8	29	Right-handed alpha
Helix 41	AE5	A	54	59	Right-handed alpha
Helix 42	AE6	A	114	119	Right-handed alpha
Helix 43	AE7	A	120	136	Right-handed alpha
Helix 44	AE8	A	140	144	Right-handed 310
Helix 45	AE9	A	181	192	Right-handed alpha
Helix 46	AF1	A	203	205	Right-handed 310
Helix 47	AF2	A	206	222	Right-handed alpha
Helix 48	AF3	A	239	247	Right-handed alpha
Helix 49	AF4	A	280	286	Right-handed alpha
Helix 50	AF5	A	315	327	Right-handed alpha
Helix 51	AF6	A	347	354	Right-handed alpha
Helix 52	AF7	A	371	377	Right-handed alpha
Helix 53	AF8	A	379	383	Right-handed 310
Helix 54	AF9	A	386	394	Right-handed alpha
Helix 55	AG1	A	481	498	Right-handed alpha
Helix 56	AG2	A	505	510	Right-handed alpha
Helix 57	AG3	A	528	541	Right-handed alpha
Helix 58	AG4	A	575	580	Right-handed alpha
Helix 59	AG5	A	580	595	Right-handed alpha
Helix 60	AG6	A	596	598	Right-handed 310
Helix 61	AG7	A	601	608	Right-handed alpha
Helix 62	AG8	A	609	613	Right-handed 310
Helix 63	AG9	A	623	645	Right-handed alpha
Helix 64	AH1	A	657	667	Right-handed alpha
Helix 65	AH2	A	670	686	Right-handed alpha
Helix 66	AH3	A	700	708	Right-handed alpha
Helix 67	AH4	A	731	742	Right-handed alpha
Helix 68	AH5	A	757	762	Right-handed alpha
Helix 69	AH6	A	799	809	Right-handed alpha
Helix 70	AH7	A	812	823	Right-handed alpha
Helix 71	AH8	A	836	845	Right-handed alpha
Helix 72	AH9	A	864	879	Right-handed alpha
Helix 73	AI1	A	883	888	Right-handed alpha
Helix 74	AI2	A	922	928	Right-handed alpha
Helix 75	AI3	A	959	971	Right-handed alpha
Helix 76	AI4	A	988	998	Right-handed alpha
Helix 77	AI5	A	1017	1020	Right-handed 310
Helix 78	AI6	A	1021	1038	Right-handed alpha
Helix 79	AI7	A	1063	1075	Right-handed alpha
Helix 80	AI8	A	1093	1106	Right-handed alpha
Helix 81	AI9	A	1150	1164	Right-handed alpha
Helix 82	AJ1	A	1174	1178	Right-handed 310
Helix 83	AJ2	A	1180	1192	Right-handed alpha
Helix 84	AJ3	A	1204	1215	Right-handed alpha
Helix 85	AJ4	A	1235	1239	Right-handed 310
Helix 86	AJ5	A	1240	1248	Right-handed alpha
Helix 87	AJ6	A	1248	1263	Right-handed alpha
Helix 88	AJ7	A	1287	1305	Right-handed alpha
Helix 89	AJ8	A	1325	1332	Right-handed alpha
Helix 90	AJ9	A	1340	1355	Right-handed alpha
Helix 91	AK1	A	1365	1374	Right-handed alpha
Helix 92	AK2	A	1385	1389	Right-handed 310
Helix 93	AK3	C	91	95	Right-handed 310
Helix 94	AK4	D	205	209	Right-handed 310
Helix 95	AK5	E	55	59	Right-handed 310
Helix 96	AK6	E	66	69	Right-handed 310
Helix 97	AK7	E	91	95	Right-handed 310
Helix 98	AK8	F	205	209	Right-handed 310

There are 34 sheets in PDB entry 7M7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	338	first strand
Strand 2	B	437	443	parallel
Strand 3	B	448	456	anti-parallel
Strand 4	B	292	301	anti-parallel
Strand 5	B	35	43	anti-parallel
Strand 6	B	271	279	anti-parallel
Strand 7	B	226	233	anti-parallel
Strand 8	B	149	154	parallel
Strand 9	B	198	202	parallel
Strand 10	A	198	201	anti-parallel
Strand 11	A	149	154	parallel
Strand 12	A	226	231	parallel
Strand 13	A	274	279	anti-parallel
Strand 14	A	35	41	anti-parallel
Strand 15	A	292	301	anti-parallel
Strand 16	A	448	456	anti-parallel
Strand 17	A	437	442	anti-parallel
Strand 18	A	334	338	parallel
Strand 19	A	367	370	parallel
Strand 20	A	420	422	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	104	first strand
Strand 2	B	906	907	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	369	first strand
Strand 2	B	420	422	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	399	400	first strand
Strand 2	B	427	428	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	478	first strand
Strand 2	B	521	524	anti-parallel
Strand 3	B	548	550	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	649	654	first strand
Strand 2	B	558	562	parallel
Strand 3	B	827	830	parallel
Strand 4	B	853	856	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	719	first strand
Strand 2	B	722	727	anti-parallel
Strand 3	B	693	697	anti-parallel
Strand 4	B	746	747	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	784	786	first strand
Strand 2	B	791	793	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	399	400	first strand
Strand 2	A	427	428	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	A	520	524	anti-parallel
Strand 3	A	547	550	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	649	654	first strand
Strand 2	A	558	562	parallel
Strand 3	A	828	830	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	692	697	first strand
Strand 2	A	722	728	anti-parallel
Strand 3	A	712	719	anti-parallel

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There are 11 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	978	980	first strand
Strand 2	A	949	953	parallel
Strand 3	A	1002	1008	parallel
Strand 4	A	1043	1048	parallel
Strand 5	A	1084	1088	parallel
Strand 6	A	1112	1116	parallel
Strand 7	A	1119	1127	anti-parallel
Strand 8	A	929	936	anti-parallel
Strand 9	A	1359	1361	anti-parallel
Strand 10	A	1313	1314	parallel
Strand 11	A	1274	1275	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1142	1143	first strand
Strand 2	A	1167	1172	parallel
Strand 3	A	1195	1199	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1145	1146	first strand
Strand 2	A	1225	1226	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	9	first strand
Strand 2	C	19	27	anti-parallel
Strand 3	C	82	88	anti-parallel
Strand 4	C	73	77	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	114	118	parallel
Strand 3	C	96	101	anti-parallel
Strand 4	C	37	41	anti-parallel
Strand 5	C	48	53	anti-parallel
Strand 6	C	62	64	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	144	148	anti-parallel
Strand 3	C	186	190	anti-parallel
Strand 4	C	170	172	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	161	first strand
Strand 2	C	201	207	anti-parallel
Strand 3	C	212	218	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	177	first strand
Strand 2	C	183	184	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	22	first strand
Strand 2	D	35	41	anti-parallel
Strand 3	D	91	96	anti-parallel
Strand 4	D	83	87	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	127	128	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	75	first strand
Strand 2	D	65	70	anti-parallel
Strand 3	D	54	59	anti-parallel
Strand 4	D	106	111	anti-parallel
Strand 5	D	124	125	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	140	first strand
Strand 2	D	152	161	anti-parallel
Strand 3	D	195	203	anti-parallel
Strand 4	D	181	185	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	170	first strand
Strand 2	D	216	218	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	9	first strand
Strand 2	E	19	27	anti-parallel
Strand 3	E	82	88	anti-parallel
Strand 4	E	73	77	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	14	first strand
Strand 2	E	114	118	parallel
Strand 3	E	96	101	anti-parallel
Strand 4	E	37	41	anti-parallel
Strand 5	E	47	53	anti-parallel
Strand 6	E	62	64	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	130	131	first strand
Strand 2	E	144	148	anti-parallel
Strand 3	E	186	190	anti-parallel
Strand 4	E	170	172	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	161	first strand
Strand 2	E	201	207	anti-parallel
Strand 3	E	212	218	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	177	first strand
Strand 2	E	183	184	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	22	first strand
Strand 2	F	35	41	anti-parallel
Strand 3	F	91	96	anti-parallel
Strand 4	F	83	87	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	29	first strand
Strand 2	F	124	128	parallel
Strand 3	F	105	111	anti-parallel
Strand 4	F	54	59	anti-parallel
Strand 5	F	65	70	anti-parallel
Strand 6	F	74	75	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	140	first strand
Strand 2	F	152	161	anti-parallel
Strand 3	F	195	203	anti-parallel
Strand 4	F	181	185	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	170	first strand
Strand 2	F	216	218	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7M7I

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M7I