Analysis of interatomic Contacts of Structural Units in PDB entry:
7M8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M8W entry

There are 2 chains in PDB entry 7M8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3THR 307
A
 PRO 309ASP 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7M8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 20Right-handed alpha
Helix 2
AA2
A
32 60Right-handed alpha
Helix 3
AA3
A
64 93Right-handed alpha
Helix 4
AA4
A
101 135Right-handed alpha
Helix 5
AA5
A
135 143Right-handed alpha
Helix 6
AA6
A
144 163Right-handed alpha
Helix 7
AA7
A
163 169Right-handed alpha
Helix 8
AA8
A
186 189Right-handed 310
Helix 9
AA9
A
194 214Right-handed alpha
Helix 10
AB1
A
215 904Right-handed alpha
Helix 11
AB2
A
1070 1081Right-handed alpha
Helix 12
AB3
A
1084 1090Right-handed alpha
Helix 13
AB4
A
1092 1112Right-handed alpha
Helix 14
AB5
A
1114 1123Right-handed alpha
Helix 15
AB6
A
1125 1135Right-handed alpha
Helix 16
AB7
A
1136 1142Right-handed alpha
Helix 17
AB8
A
1142 1156Right-handed alpha
Helix 18
AB9
A
1158 238Right-handed 310
Helix 19
AC1
A
244 273Right-handed alpha
Helix 20
AC2
A
274 276Right-handed 310
Helix 21
AC3
A
277 307Right-handed alpha
Helix 22
AC4
A
308 325Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7M8W.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
180 184anti-parallel
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