Analysis of interatomic Contacts of Structural Units in PDB entry:
7M92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7M92 entry

There are 2 chains in PDB entry 7M92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASN 359
B
 SER 2ASN 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7M92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 25Right-handed alpha
Helix 2
AA2
A
68 78Right-handed alpha
Helix 3
AA3
A
91 96Right-handed alpha
Helix 4
AA4
A
97 104Right-handed alpha
Helix 5
AA5
A
119 132Right-handed alpha
Helix 6
AA6
A
140 144Right-handed 310
Helix 7
AA7
A
150 160Right-handed alpha
Helix 8
AA8
A
172 183Right-handed alpha
Helix 9
AA9
A
191 202Right-handed alpha
Helix 10
AB1
A
209 214Right-handed alpha
Helix 11
AB2
A
215 230Right-handed alpha
Helix 12
AB3
A
246 250Right-handed 310
Helix 13
AB4
A
254 262Right-handed alpha
Helix 14
AB5
A
265 279Right-handed alpha
Helix 15
AB6
A
307 312Right-handed 310
Helix 16
AB7
A
338 358Right-handed alpha
Helix 17
AB8
B
13 25Right-handed alpha
Helix 18
AB9
B
68 78Right-handed alpha
Helix 19
AC1
B
91 97Right-handed alpha
Helix 20
AC2
B
97 104Right-handed alpha
Helix 21
AC3
B
119 132Right-handed alpha
Helix 22
AC4
B
140 144Right-handed 310
Helix 23
AC5
B
150 160Right-handed alpha
Helix 24
AC6
B
172 181Right-handed alpha
Helix 25
AC7
B
191 201Right-handed alpha
Helix 26
AC8
B
208 212Right-handed 310
Helix 27
AC9
B
215 230Right-handed alpha
Helix 28
AD1
B
246 251Right-handed alpha
Helix 29
AD2
B
254 262Right-handed alpha
Helix 30
AD3
B
265 279Right-handed alpha
Helix 31
AD4
B
307 311Right-handed 310
Helix 32
AD5
B
338 358Right-handed alpha
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There are 3 sheets in PDB entry 7M92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
31 38anti-parallel
Strand 4
A
4 10parallel
Strand 5
A
83 87parallel
Strand 6
A
107 109parallel
Strand 7
A
138 139parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 241first strand
Strand 2
A
295 304parallel
Strand 3
A
281 290anti-parallel
Strand 4
A
164 170anti-parallel
Strand 5
A
316 323anti-parallel
Strand 6
A
330 335anti-parallel
Strand 7
B
330 334anti-parallel
Strand 8
B
317 323anti-parallel
Strand 9
B
164 170anti-parallel
Strand 10
B
281 290anti-parallel
Strand 11
B
295 304anti-parallel
Strand 12
B
240 241parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
31 38anti-parallel
Strand 4
B
4 10parallel
Strand 5
B
83 87parallel
Strand 6
B
107 109parallel
Strand 7
B
138 139parallel
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