Analysis of interatomic Contacts of Structural Units in PDB entry:
7M9C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7M9C entry

There are 16 chains in PDB entry 7M9C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 19	TYR 275
B	GLU 19	TYR 275
C	GLU 19	TYR 275
D	GLU 19	TYR 275
E	GLU 19	TYR 275
F	GLU 19	TYR 275
G	GLU 19	TYR 275
H	GLU 19	TYR 275
I	GLU 19	TYR 275
J	GLU 19	TYR 275
K	GLU 19	TYR 275
L	GLU 19	TYR 275
M	A -3	A 29
N	T -1	T 31
O	GLU 19	TYR 275
P	GLU 19	TYR 275

There are178 helices in PDB entry 7M9C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	29	Right-handed alpha
Helix 2	AA2	A	36	53	Right-handed alpha
Helix 3	AA3	A	65	75	Right-handed alpha
Helix 4	AA4	A	101	113	Right-handed alpha
Helix 5	AA5	A	121	136	Right-handed alpha
Helix 6	AA6	A	152	164	Right-handed alpha
Helix 7	AA7	A	173	183	Right-handed alpha
Helix 8	AA8	A	183	188	Right-handed alpha
Helix 9	AA9	A	200	216	Right-handed alpha
Helix 10	AB1	A	226	238	Right-handed alpha
Helix 11	AB2	A	240	259	Right-handed alpha
Helix 12	AB3	A	264	272	Right-handed alpha
Helix 13	AB4	B	20	29	Right-handed alpha
Helix 14	AB5	B	36	53	Right-handed alpha
Helix 15	AB6	B	65	77	Right-handed alpha
Helix 16	AB7	B	101	113	Right-handed alpha
Helix 17	AB8	B	121	136	Right-handed alpha
Helix 18	AB9	B	145	149	Right-handed 310
Helix 19	AC1	B	150	151	Right-handed 310
Helix 20	AC2	B	152	164	Right-handed alpha
Helix 21	AC3	B	173	181	Right-handed alpha
Helix 22	AC4	B	183	188	Right-handed alpha
Helix 23	AC5	B	200	215	Right-handed alpha
Helix 24	AC6	B	226	238	Right-handed alpha
Helix 25	AC7	B	240	258	Right-handed alpha
Helix 26	AC8	B	264	275	Right-handed alpha
Helix 27	AC9	C	20	29	Right-handed alpha
Helix 28	AD1	C	36	53	Right-handed alpha
Helix 29	AD2	C	65	77	Right-handed alpha
Helix 30	AD3	C	101	113	Right-handed alpha
Helix 31	AD4	C	121	136	Right-handed alpha
Helix 32	AD5	C	146	149	Right-handed 310
Helix 33	AD6	C	150	164	Right-handed alpha
Helix 34	AD7	C	174	181	Right-handed alpha
Helix 35	AD8	C	183	190	Right-handed alpha
Helix 36	AD9	C	200	215	Right-handed alpha
Helix 37	AE1	C	226	238	Right-handed alpha
Helix 38	AE2	C	240	259	Right-handed alpha
Helix 39	AE3	C	264	275	Right-handed alpha
Helix 40	AE4	D	20	30	Right-handed alpha
Helix 41	AE5	D	36	53	Right-handed alpha
Helix 42	AE6	D	65	78	Right-handed alpha
Helix 43	AE7	D	103	113	Right-handed alpha
Helix 44	AE8	D	121	137	Right-handed alpha
Helix 45	AE9	D	146	149	Right-handed 310
Helix 46	AF1	D	153	164	Right-handed alpha
Helix 47	AF2	D	173	181	Right-handed alpha
Helix 48	AF3	D	183	190	Right-handed alpha
Helix 49	AF4	D	200	215	Right-handed alpha
Helix 50	AF5	D	226	238	Right-handed alpha
Helix 51	AF6	D	240	258	Right-handed alpha
Helix 52	AF7	D	264	275	Right-handed alpha
Helix 53	AF8	E	20	29	Right-handed alpha
Helix 54	AF9	E	36	53	Right-handed alpha
Helix 55	AG1	E	65	77	Right-handed alpha
Helix 56	AG2	E	101	113	Right-handed alpha
Helix 57	AG3	E	121	136	Right-handed alpha
Helix 58	AG4	E	146	149	Right-handed 310
Helix 59	AG5	E	153	164	Right-handed alpha
Helix 60	AG6	E	174	181	Right-handed alpha
Helix 61	AG7	E	183	190	Right-handed alpha
Helix 62	AG8	E	200	215	Right-handed alpha
Helix 63	AG9	E	226	238	Right-handed alpha
Helix 64	AH1	E	240	258	Right-handed alpha
Helix 65	AH2	E	264	275	Right-handed alpha
Helix 66	AH3	F	20	29	Right-handed alpha
Helix 67	AH4	F	36	53	Right-handed alpha
Helix 68	AH5	F	65	77	Right-handed alpha
Helix 69	AH6	F	101	113	Right-handed alpha
Helix 70	AH7	F	121	136	Right-handed alpha
Helix 71	AH8	F	150	164	Right-handed alpha
Helix 72	AH9	F	173	182	Right-handed alpha
Helix 73	AI1	F	183	190	Right-handed alpha
Helix 74	AI2	F	201	215	Right-handed alpha
Helix 75	AI3	F	226	238	Right-handed alpha
Helix 76	AI4	F	240	257	Right-handed alpha
Helix 77	AI5	F	264	275	Right-handed alpha
Helix 78	AI6	G	20	29	Right-handed alpha
Helix 79	AI7	G	36	53	Right-handed alpha
Helix 80	AI8	G	65	77	Right-handed alpha
Helix 81	AI9	G	101	113	Right-handed alpha
Helix 82	AJ1	G	121	136	Right-handed alpha
Helix 83	AJ2	G	153	164	Right-handed alpha
Helix 84	AJ3	G	174	183	Right-handed alpha
Helix 85	AJ4	G	183	190	Right-handed alpha
Helix 86	AJ5	G	200	215	Right-handed alpha
Helix 87	AJ6	G	226	238	Right-handed alpha
Helix 88	AJ7	G	240	258	Right-handed alpha
Helix 89	AJ8	G	264	275	Right-handed alpha
Helix 90	AJ9	H	20	30	Right-handed alpha
Helix 91	AK1	H	36	53	Right-handed alpha
Helix 92	AK2	H	65	77	Right-handed alpha
Helix 93	AK3	H	101	113	Right-handed alpha
Helix 94	AK4	H	121	136	Right-handed alpha
Helix 95	AK5	H	153	165	Right-handed alpha
Helix 96	AK6	H	174	183	Right-handed alpha
Helix 97	AK7	H	183	190	Right-handed alpha
Helix 98	AK8	H	200	215	Right-handed alpha
Helix 99	AK9	H	226	238	Right-handed alpha
Helix 100	AL1	H	240	259	Right-handed alpha
Helix 101	AL2	H	264	275	Right-handed alpha
Helix 102	AL3	I	20	30	Right-handed alpha
Helix 103	AL4	I	36	53	Right-handed alpha
Helix 104	AL5	I	65	77	Right-handed alpha
Helix 105	AL6	I	103	113	Right-handed alpha
Helix 106	AL7	I	121	136	Right-handed alpha
Helix 107	AL8	I	145	149	Right-handed 310
Helix 108	AL9	I	150	152	Right-handed 310
Helix 109	AM1	I	153	164	Right-handed alpha
Helix 110	AM2	I	173	181	Right-handed alpha
Helix 111	AM3	I	183	190	Right-handed alpha
Helix 112	AM4	I	200	215	Right-handed alpha
Helix 113	AM5	I	226	238	Right-handed alpha
Helix 114	AM6	I	240	258	Right-handed alpha
Helix 115	AM7	I	264	275	Right-handed alpha
Helix 116	AM8	J	20	30	Right-handed alpha
Helix 117	AM9	J	36	53	Right-handed alpha
Helix 118	AN1	J	65	77	Right-handed alpha
Helix 119	AN2	J	101	113	Right-handed alpha
Helix 120	AN3	J	121	136	Right-handed alpha
Helix 121	AN4	J	145	149	Right-handed 310
Helix 122	AN5	J	150	164	Right-handed alpha
Helix 123	AN6	J	173	181	Right-handed alpha
Helix 124	AN7	J	183	190	Right-handed alpha
Helix 125	AN8	J	200	215	Right-handed alpha
Helix 126	AN9	J	226	238	Right-handed alpha
Helix 127	AO1	J	240	258	Right-handed alpha
Helix 128	AO2	J	264	273	Right-handed alpha
Helix 129	AO3	K	20	29	Right-handed alpha
Helix 130	AO4	K	36	53	Right-handed alpha
Helix 131	AO5	K	65	77	Right-handed alpha
Helix 132	AO6	K	101	113	Right-handed alpha
Helix 133	AO7	K	121	136	Right-handed alpha
Helix 134	AO8	K	145	149	Right-handed 310
Helix 135	AO9	K	152	164	Right-handed alpha
Helix 136	AP1	K	173	181	Right-handed alpha
Helix 137	AP2	K	183	190	Right-handed alpha
Helix 138	AP3	K	200	216	Right-handed alpha
Helix 139	AP4	K	226	238	Right-handed alpha
Helix 140	AP5	K	240	258	Right-handed alpha
Helix 141	AP6	K	264	275	Right-handed alpha
Helix 142	AP7	L	20	30	Right-handed alpha
Helix 143	AP8	L	36	53	Right-handed alpha
Helix 144	AP9	L	65	77	Right-handed alpha
Helix 145	AQ1	L	101	113	Right-handed alpha
Helix 146	AQ2	L	121	136	Right-handed alpha
Helix 147	AQ3	L	145	149	Right-handed 310
Helix 148	AQ4	L	150	164	Right-handed alpha
Helix 149	AQ5	L	175	181	Right-handed alpha
Helix 150	AQ6	L	183	190	Right-handed alpha
Helix 151	AQ7	L	201	215	Right-handed alpha
Helix 152	AQ8	L	226	238	Right-handed alpha
Helix 153	AQ9	L	240	258	Right-handed alpha
Helix 154	AR1	L	264	275	Right-handed alpha
Helix 155	AR2	O	20	29	Right-handed alpha
Helix 156	AR3	O	36	53	Right-handed alpha
Helix 157	AR4	O	65	75	Right-handed alpha
Helix 158	AR5	O	101	113	Right-handed alpha
Helix 159	AR6	O	121	136	Right-handed alpha
Helix 160	AR7	O	152	164	Right-handed alpha
Helix 161	AR8	O	173	183	Right-handed alpha
Helix 162	AR9	O	183	188	Right-handed alpha
Helix 163	AS1	O	200	216	Right-handed alpha
Helix 164	AS2	O	226	238	Right-handed alpha
Helix 165	AS3	O	240	259	Right-handed alpha
Helix 166	AS4	O	264	272	Right-handed alpha
Helix 167	AS5	P	20	29	Right-handed alpha
Helix 168	AS6	P	36	53	Right-handed alpha
Helix 169	AS7	P	65	77	Right-handed alpha
Helix 170	AS8	P	101	113	Right-handed alpha
Helix 171	AS9	P	121	136	Right-handed alpha
Helix 172	AT1	P	153	164	Right-handed alpha
Helix 173	AT2	P	174	183	Right-handed alpha
Helix 174	AT3	P	183	190	Right-handed alpha
Helix 175	AT4	P	200	215	Right-handed alpha
Helix 176	AT5	P	226	238	Right-handed alpha
Helix 177	AT6	P	240	258	Right-handed alpha
Helix 178	AT7	P	264	275	Right-handed alpha

There are 14 sheets in PDB entry 7M9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	140	143	parallel
Strand 3	A	167	172	parallel
Strand 4	A	56	59	parallel
Strand 5	A	193	195	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	94	first strand
Strand 2	B	140	143	parallel
Strand 3	B	167	172	parallel
Strand 4	B	56	59	parallel
Strand 5	B	193	195	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	140	144	parallel
Strand 3	C	167	172	parallel
Strand 4	C	56	60	parallel
Strand 5	C	193	196	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	94	first strand
Strand 2	D	140	144	parallel
Strand 3	D	167	172	parallel
Strand 4	D	56	59	parallel
Strand 5	D	193	195	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	94	first strand
Strand 2	E	140	144	parallel
Strand 3	E	167	172	parallel
Strand 4	E	56	59	parallel
Strand 5	E	193	195	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	94	first strand
Strand 2	F	140	143	parallel
Strand 3	F	169	172	parallel
Strand 4	F	56	59	parallel
Strand 5	F	193	195	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	94	first strand
Strand 2	G	140	143	parallel
Strand 3	G	167	172	parallel
Strand 4	G	56	59	parallel
Strand 5	G	193	195	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	91	94	first strand
Strand 2	H	140	144	parallel
Strand 3	H	167	172	parallel
Strand 4	H	56	59	parallel
Strand 5	H	193	195	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	94	first strand
Strand 2	I	140	143	parallel
Strand 3	I	167	172	parallel
Strand 4	I	56	60	parallel
Strand 5	I	193	196	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	91	94	first strand
Strand 2	J	140	143	parallel
Strand 3	J	169	172	parallel
Strand 4	J	56	60	parallel
Strand 5	J	193	196	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	91	94	first strand
Strand 2	K	140	143	parallel
Strand 3	K	167	172	parallel
Strand 4	K	56	59	parallel
Strand 5	K	193	195	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	91	94	first strand
Strand 2	L	140	143	parallel
Strand 3	L	167	172	parallel
Strand 4	L	56	59	parallel
Strand 5	L	193	195	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	91	94	first strand
Strand 2	O	140	143	parallel
Strand 3	O	167	172	parallel
Strand 4	O	56	59	parallel
Strand 5	O	193	195	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	91	94	first strand
Strand 2	P	140	143	parallel
Strand 3	P	167	172	parallel
Strand 4	P	56	59	parallel
Strand 5	P	193	195	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7M9C

Analysis of interatomic Contacts of Structural Units in PDB entry:
7M9C