Analysis of interatomic Contacts of Structural Units in PDB entry:
7MBJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MBJ entry

There are 2 chains in PDB entry 7MBJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 79MET 202
B
 PHE 81THR 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7MBJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 100Right-handed alpha
Helix 2
AA2
A
108 119Right-handed alpha
Helix 3
AA3
A
167 173Right-handed alpha
Helix 4
AA4
A
194 202Right-handed alpha
Helix 5
AA5
B
87 100Right-handed alpha
Helix 6
AA6
B
103 107Right-handed 310
Helix 7
AA7
B
108 119Right-handed alpha
Helix 8
AA8
B
167 174Right-handed alpha
Helix 9
AA9
B
194 202Right-handed alpha
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There are 4 sheets in PDB entry 7MBJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
187 193anti-parallel
Strand 3
A
139 145anti-parallel
Strand 4
A
165 166anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 131first strand
Strand 2
A
180 183anti-parallel
Strand 3
A
148 152anti-parallel
Strand 4
A
155 160anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 124first strand
Strand 2
B
187 193anti-parallel
Strand 3
B
139 145anti-parallel
Strand 4
B
165 166anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 131first strand
Strand 2
B
180 183anti-parallel
Strand 3
B
148 152anti-parallel
Strand 4
B
155 160anti-parallel
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