Analysis of interatomic Contacts of Structural Units in PDB entry:
7MBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MBW entry

There are 3 chains in PDB entry 7MBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3GLU 487
B
 ALA 3GLU 485
C
 ARG 5LEU 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 7MBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 26Right-handed alpha
Helix 2
AA2
A
29 40Right-handed alpha
Helix 3
AA3
A
47 52Right-handed alpha
Helix 4
AA4
A
54 63Right-handed alpha
Helix 5
AA5
A
64 69Right-handed alpha
Helix 6
AA6
A
73 91Right-handed alpha
Helix 7
AA7
A
92 95Right-handed 310
Helix 8
AA8
A
100 114Right-handed alpha
Helix 9
AA9
A
141 151Right-handed alpha
Helix 10
AB1
A
179 195Right-handed alpha
Helix 11
AB2
A
198 203Right-handed alpha
Helix 12
AB3
A
209 224Right-handed alpha
Helix 13
AB4
A
233 237Right-handed 310
Helix 14
AB5
A
238 243Right-handed alpha
Helix 15
AB6
A
244 259Right-handed alpha
Helix 16
AB7
A
271 276Right-handed alpha
Helix 17
AB8
A
305 318Right-handed alpha
Helix 18
AB9
A
329 341Right-handed alpha
Helix 19
AC1
A
343 362Right-handed alpha
Helix 20
AC2
A
367 379Right-handed alpha
Helix 21
AC3
A
382 392Right-handed alpha
Helix 22
AC4
A
393 400Right-handed alpha
Helix 23
AC5
A
407 424Right-handed alpha
Helix 24
AC6
A
426 435Right-handed alpha
Helix 25
AC7
A
437 448Right-handed alpha
Helix 26
AC8
A
452 467Right-handed alpha
Helix 27
AC9
A
471 486Right-handed alpha
Helix 28
AD1
B
21 27Right-handed alpha
Helix 29
AD2
B
29 40Right-handed alpha
Helix 30
AD3
B
47 53Right-handed alpha
Helix 31
AD4
B
54 63Right-handed alpha
Helix 32
AD5
B
64 69Right-handed alpha
Helix 33
AD6
B
73 93Right-handed alpha
Helix 34
AD7
B
100 115Right-handed alpha
Helix 35
AD8
B
141 152Right-handed alpha
Helix 36
AD9
B
179 196Right-handed alpha
Helix 37
AE1
B
198 203Right-handed alpha
Helix 38
AE2
B
209 224Right-handed alpha
Helix 39
AE3
B
233 237Right-handed 310
Helix 40
AE4
B
238 243Right-handed alpha
Helix 41
AE5
B
244 260Right-handed alpha
Helix 42
AE6
B
270 276Right-handed 310
Helix 43
AE7
B
305 317Right-handed alpha
Helix 44
AE8
B
329 341Right-handed alpha
Helix 45
AE9
B
343 362Right-handed alpha
Helix 46
AF1
B
367 379Right-handed alpha
Helix 47
AF2
B
382 392Right-handed alpha
Helix 48
AF3
B
393 400Right-handed alpha
Helix 49
AF4
B
407 421Right-handed alpha
Helix 50
AF5
B
426 435Right-handed alpha
Helix 51
AF6
B
437 448Right-handed alpha
Helix 52
AF7
B
452 467Right-handed alpha
Helix 53
AF8
B
471 484Right-handed alpha
Helix 54
AF9
C
21 27Right-handed alpha
Helix 55
AG1
C
29 40Right-handed alpha
Helix 56
AG2
C
49 53Right-handed 310
Helix 57
AG3
C
54 69Right-handed alpha
Helix 58
AG4
C
73 91Right-handed alpha
Helix 59
AG5
C
101 115Right-handed alpha
Helix 60
AG6
C
141 153Right-handed alpha
Helix 61
AG7
C
179 196Right-handed alpha
Helix 62
AG8
C
198 203Right-handed alpha
Helix 63
AG9
C
209 224Right-handed alpha
Helix 64
AH1
C
238 243Right-handed alpha
Helix 65
AH2
C
244 260Right-handed alpha
Helix 66
AH3
C
268 275Right-handed alpha
Helix 67
AH4
C
305 317Right-handed alpha
Helix 68
AH5
C
329 341Right-handed alpha
Helix 69
AH6
C
343 362Right-handed alpha
Helix 70
AH7
C
367 379Right-handed alpha
Helix 71
AH8
C
382 392Right-handed alpha
Helix 72
AH9
C
393 401Right-handed alpha
Helix 73
AI1
C
407 425Right-handed alpha
Helix 74
AI2
C
426 435Right-handed alpha
Helix 75
AI3
C
437 448Right-handed alpha
Helix 76
AI4
C
452 467Right-handed alpha
Helix 77
AI5
C
471 483Right-handed alpha
Helix 78
AI6
D
21 27Right-handed alpha
Helix 79
AI7
D
29 39Right-handed alpha
Helix 80
AI8
D
47 52Right-handed 310
Helix 81
AI9
D
54 69Right-handed alpha
Helix 82
AJ1
D
73 94Right-handed alpha
Helix 83
AJ2
D
102 115Right-handed alpha
Helix 84
AJ3
D
141 151Right-handed alpha
Helix 85
AJ4
D
179 196Right-handed alpha
Helix 86
AJ5
D
198 204Right-handed alpha
Helix 87
AJ6
D
209 224Right-handed alpha
Helix 88
AJ7
D
233 237Right-handed 310
Helix 89
AJ8
D
238 243Right-handed alpha
Helix 90
AJ9
D
244 260Right-handed alpha
Helix 91
AK1
D
270 277Right-handed 310
Helix 92
AK2
D
305 317Right-handed alpha
Helix 93
AK3
D
329 341Right-handed alpha
Helix 94
AK4
D
343 362Right-handed alpha
Helix 95
AK5
D
367 379Right-handed alpha
Helix 96
AK6
D
382 392Right-handed alpha
Helix 97
AK7
D
393 401Right-handed alpha
Helix 98
AK8
D
407 422Right-handed alpha
Helix 99
AK9
D
426 435Right-handed alpha
Helix 100
AL1
D
437 448Right-handed alpha
Helix 101
AL2
D
452 467Right-handed alpha
Helix 102
AL3
D
471 486Right-handed alpha
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There are 7 sheets in PDB entry 7MBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
156 159parallel
Strand 3
A
164 173anti-parallel
Strand 4
A
226 232parallel
Strand 5
A
263 267parallel
Strand 6
A
131 135parallel
Strand 7
A
289 292parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
303 304anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
156 158parallel
Strand 3
B
165 167anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 173first strand
Strand 2
B
228 232parallel
Strand 3
B
263 267parallel
Strand 4
B
132 135parallel
Strand 5
B
289 292parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 7first strand
Strand 2
C
156 159parallel
Strand 3
C
164 173anti-parallel
Strand 4
C
226 232parallel
Strand 5
C
263 267parallel
Strand 6
C
131 136parallel
Strand 7
C
289 293parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 7first strand
Strand 2
D
156 159parallel
Strand 3
D
164 173anti-parallel
Strand 4
D
226 232parallel
Strand 5
D
263 267parallel
Strand 6
D
131 135parallel
Strand 7
D
289 292parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
299 300first strand
Strand 2
D
303 304anti-parallel
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