Analysis of interatomic Contacts of Structural Units in PDB entry:
7MBZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MBZ entry

There are 5 chains in PDB entry 7MBZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ASP 226
E
 GLU 44GLY 284
B
 THR 5ASP 226
C
 ILE 2ARG 243
D
 MET 1ASP 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7MBZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 55Right-handed alpha
Helix 2
AA2
A
60 77Right-handed alpha
Helix 3
AA3
A
78 86Right-handed alpha
Helix 4
AA4
A
86 95Right-handed alpha
Helix 5
AA5
A
99 125Right-handed alpha
Helix 6
AA6
A
128 137Right-handed alpha
Helix 7
AA7
A
140 148Right-handed alpha
Helix 8
AA8
A
148 153Right-handed alpha
Helix 9
AA9
A
153 180Right-handed alpha
Helix 10
AB1
A
181 191Right-handed alpha
Helix 11
AB2
A
196 225Right-handed alpha
Helix 12
AB3
E
52 61Right-handed alpha
Helix 13
AB4
E
61 69Right-handed alpha
Helix 14
AB5
E
81 90Right-handed alpha
Helix 15
AB6
E
100 111Right-handed alpha
Helix 16
AB7
E
135 139Right-handed 310
Helix 17
AB8
E
150 164Right-handed alpha
Helix 18
AB9
E
179 181Right-handed 310
Helix 19
AC1
E
196 200Right-handed 310
Helix 20
AC2
E
201 206Right-handed 310
Helix 21
AC3
E
220 227Right-handed 310
Helix 22
AC4
E
245 247Right-handed 310
Helix 23
AC5
E
249 259Right-handed alpha
Helix 24
AC6
E
261 272Right-handed alpha
Helix 25
AC7
E
278 282Right-handed 310
Helix 26
AC8
B
6 16Right-handed alpha
Helix 27
AC9
B
16 54Right-handed alpha
Helix 28
AD1
B
60 77Right-handed alpha
Helix 29
AD2
B
78 86Right-handed alpha
Helix 30
AD3
B
86 95Right-handed alpha
Helix 31
AD4
B
99 125Right-handed alpha
Helix 32
AD5
B
128 137Right-handed alpha
Helix 33
AD6
B
140 147Right-handed alpha
Helix 34
AD7
B
153 179Right-handed alpha
Helix 35
AD8
B
181 189Right-handed alpha
Helix 36
AD9
B
196 226Right-handed alpha
Helix 37
AE1
C
44 53Right-handed alpha
Helix 38
AE2
C
74 84Right-handed alpha
Helix 39
AE3
C
99 111Right-handed alpha
Helix 40
AE4
C
114 129Right-handed alpha
Helix 41
AE5
C
130 135Right-handed 310
Helix 42
AE6
C
143 157Right-handed alpha
Helix 43
AE7
C
173 192Right-handed alpha
Helix 44
AE8
C
201 207Right-handed alpha
Helix 45
AE9
C
227 230Right-handed 310
Helix 46
AF1
C
235 243Right-handed alpha
Helix 47
AF2
D
48 53Right-handed alpha
Helix 48
AF3
D
75 84Right-handed alpha
Helix 49
AF4
D
99 112Right-handed alpha
Helix 50
AF5
D
114 130Right-handed alpha
Helix 51
AF6
D
143 157Right-handed alpha
Helix 52
AF7
D
167 172Right-handed 310
Helix 53
AF8
D
173 188Right-handed alpha
Helix 54
AF9
D
202 209Right-handed alpha
Helix 55
AG1
D
235 243Right-handed alpha
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There are 9 sheets in PDB entry 7MBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
73 78first strand
Strand 2
E
45 50parallel
Strand 3
E
95 96parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
115 120first strand
Strand 2
E
239 243anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
127 130first strand
Strand 2
E
209 212anti-parallel
Strand 3
E
144 148parallel
Strand 4
E
191 195parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
168 169first strand
Strand 2
E
183 185anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 25first strand
Strand 2
C
3 9anti-parallel
Strand 3
C
60 65anti-parallel
Strand 4
C
68 69anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 198first strand
Strand 2
C
35 39parallel
Strand 3
C
211 216parallel
Strand 4
C
219 225anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 86first strand
Strand 2
C
162 163parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 29first strand
Strand 2
D
2 9anti-parallel
Strand 3
D
62 65anti-parallel
Strand 4
D
68 69anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 87first strand
Strand 2
D
163 164parallel
Strand 3
D
195 198parallel
Strand 4
D
34 38parallel
Strand 5
D
211 216parallel
Strand 6
D
219 223anti-parallel
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