Analysis of interatomic Contacts of Structural Units in PDB entry:
7MCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MCJ entry

There are 2 chains in PDB entry 7MCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6LYS 286
B
 SER 13LYS 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7MCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
18 23Right-handed alpha
Helix 3
AA3
A
43 58Right-handed alpha
Helix 4
AA4
A
75 85Right-handed alpha
Helix 5
AA5
A
95 108Right-handed alpha
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
137 141Right-handed 310
Helix 8
AA8
A
142 144Right-handed 310
Helix 9
AA9
A
145 157Right-handed alpha
Helix 10
AB1
A
172 179Right-handed alpha
Helix 11
AB2
A
184 198Right-handed alpha
Helix 12
AB3
A
206 217Right-handed alpha
Helix 13
AB4
A
227 245Right-handed alpha
Helix 14
AB5
A
245 253Right-handed alpha
Helix 15
AB6
A
254 274Right-handed alpha
Helix 16
AB7
B
13 17Right-handed 310
Helix 17
AB8
B
18 23Right-handed alpha
Helix 18
AB9
B
43 58Right-handed alpha
Helix 19
AC1
B
75 85Right-handed alpha
Helix 20
AC2
B
95 108Right-handed alpha
Helix 21
AC3
B
121 125Right-handed 310
Helix 22
AC4
B
137 141Right-handed 310
Helix 23
AC5
B
142 144Right-handed 310
Helix 24
AC6
B
145 157Right-handed alpha
Helix 25
AC7
B
172 179Right-handed alpha
Helix 26
AC8
B
184 198Right-handed alpha
Helix 27
AC9
B
206 217Right-handed alpha
Helix 28
AD1
B
227 245Right-handed alpha
Helix 29
AD2
B
245 253Right-handed alpha
Helix 30
AD3
B
254 274Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7MCJ.

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
88 93parallel
Strand 3
A
66 70parallel
Strand 4
A
131 135parallel
Strand 5
A
162 170parallel
Strand 6
A
277 285anti-parallel
Strand 7
A
220 226anti-parallel
Strand 8
B
220 226anti-parallel
Strand 9
B
278 285anti-parallel
Strand 10
B
162 169anti-parallel
Strand 11
B
131 135parallel
Strand 12
B
66 70parallel
Strand 13
B
88 93parallel
Strand 14
B
115 119parallel
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