Analysis of interatomic Contacts of Structural Units in PDB entry:
7MCM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MCM entry

There are 2 chains in PDB entry 7MCM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLN 240
B
 VAL 2PRO 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7MCM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 25Right-handed 310
Helix 2
AA2
A
30 47Right-handed alpha
Helix 3
AA3
A
91 93Right-handed 310
Helix 4
AA4
A
94 103Right-handed alpha
Helix 5
AA5
A
117 126Right-handed alpha
Helix 6
AA6
A
139 145Right-handed 310
Helix 7
AA7
A
151 161Right-handed alpha
Helix 8
AA8
A
161 172Right-handed alpha
Helix 9
AA9
A
177 183Right-handed alpha
Helix 10
AB1
A
191 193Right-handed 310
Helix 11
AB2
A
194 208Right-handed alpha
Helix 12
AB3
A
210 227Right-handed alpha
Helix 13
AB4
A
228 240Right-handed alpha
Helix 14
AB5
B
21 25Right-handed 310
Helix 15
AB6
B
30 47Right-handed alpha
Helix 16
AB7
B
91 93Right-handed 310
Helix 17
AB8
B
94 103Right-handed alpha
Helix 18
AB9
B
117 126Right-handed alpha
Helix 19
AC1
B
139 145Right-handed 310
Helix 20
AC2
B
151 161Right-handed alpha
Helix 21
AC3
B
161 172Right-handed alpha
Helix 22
AC4
B
177 183Right-handed alpha
Helix 23
AC5
B
191 193Right-handed 310
Helix 24
AC6
B
194 208Right-handed alpha
Helix 25
AC7
B
210 225Right-handed alpha
Helix 26
AC8
B
228 240Right-handed alpha
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There are 4 sheets in PDB entry 7MCM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 11first strand
Strand 2
A
14 19anti-parallel
Strand 3
A
52 57parallel
Strand 4
A
107 111parallel
Strand 5
A
128 132parallel
Strand 6
A
189 190parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
114 116parallel
Strand 3
A
136 138parallel
Strand 4
A
175 176anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
14 19anti-parallel
Strand 3
B
52 57parallel
Strand 4
B
107 111parallel
Strand 5
B
128 132parallel
Strand 6
B
189 190parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
114 116parallel
Strand 3
B
136 138parallel
Strand 4
B
175 176anti-parallel
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