Analysis of interatomic Contacts of Structural Units in PDB entry:
7MEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MEW entry

There are 2 chains in PDB entry 7MEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8GLN 579
B
 SER 8GLN 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7MEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 17Right-handed alpha
Helix 2
AA2
A
18 20Right-handed 310
Helix 3
AA3
A
24 57Right-handed alpha
Helix 4
AA4
A
59 65Right-handed alpha
Helix 5
AA5
A
66 110Right-handed alpha
Helix 6
AA6
A
113 119Right-handed alpha
Helix 7
AA7
A
121 163Right-handed alpha
Helix 8
AA8
A
164 189Right-handed alpha
Helix 9
AA9
A
195 212Right-handed alpha
Helix 10
AB1
A
213 221Right-handed alpha
Helix 11
AB2
A
223 271Right-handed alpha
Helix 12
AB3
A
280 294Right-handed alpha
Helix 13
AB4
A
294 324Right-handed alpha
Helix 14
AB5
A
381 390Right-handed alpha
Helix 15
AB6
A
411 418Right-handed alpha
Helix 16
AB7
A
432 438Right-handed alpha
Helix 17
AB8
A
446 457Right-handed alpha
Helix 18
AB9
A
459 466Right-handed alpha
Helix 19
AC1
A
468 472Right-handed 310
Helix 20
AC2
A
475 479Right-handed 310
Helix 21
AC3
A
482 498Right-handed alpha
Helix 22
AC4
A
516 530Right-handed alpha
Helix 23
AC5
A
538 545Right-handed alpha
Helix 24
AC6
A
561 569Right-handed alpha
Helix 25
AC7
A
570 579Right-handed alpha
Helix 26
AC8
B
9 15Right-handed alpha
Helix 27
AC9
B
16 20Right-handed 310
Helix 28
AD1
B
24 55Right-handed alpha
Helix 29
AD2
B
59 110Right-handed alpha
Helix 30
AD3
B
112 119Right-handed alpha
Helix 31
AD4
B
120 163Right-handed alpha
Helix 32
AD5
B
164 189Right-handed alpha
Helix 33
AD6
B
196 209Right-handed alpha
Helix 34
AD7
B
211 221Right-handed alpha
Helix 35
AD8
B
223 272Right-handed alpha
Helix 36
AD9
B
280 324Right-handed alpha
Helix 37
AE1
B
381 390Right-handed alpha
Helix 38
AE2
B
411 418Right-handed alpha
Helix 39
AE3
B
432 438Right-handed alpha
Helix 40
AE4
B
446 457Right-handed alpha
Helix 41
AE5
B
459 466Right-handed alpha
Helix 42
AE6
B
468 472Right-handed 310
Helix 43
AE7
B
475 479Right-handed 310
Helix 44
AE8
B
482 498Right-handed alpha
Helix 45
AE9
B
516 530Right-handed alpha
Helix 46
AF1
B
538 545Right-handed alpha
Helix 47
AF2
B
561 569Right-handed alpha
Helix 48
AF3
B
570 579Right-handed alpha
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There are 8 sheets in PDB entry 7MEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
359 362anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 534first strand
Strand 2
A
372 375parallel
Strand 3
A
547 552parallel
Strand 4
A
555 556anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
405 406anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
501 502parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 349first strand
Strand 2
B
359 362anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
533 534first strand
Strand 2
B
372 375parallel
Strand 3
B
547 550parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 402first strand
Strand 2
B
405 406anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 420first strand
Strand 2
B
501 502parallel
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