Analysis of interatomic Contacts of Structural Units in PDB entry:
7MEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MEY entry

There are 5 chains in PDB entry 7MEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9ILE 1812
C
 MET 1LEU 71
B
 THR 3ASP 155
D
 MET 1GLY 75
F
 ARG 1GLY 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are101 helices in PDB entry 7MEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 20Right-handed alpha
Helix 2
AA2
A
25 30Right-handed alpha
Helix 3
AA3
A
33 57Right-handed alpha
Helix 4
AA4
A
58 61Right-handed 310
Helix 5
AA5
A
62 66Right-handed 310
Helix 6
AA6
A
86 92Right-handed alpha
Helix 7
AA7
A
93 98Right-handed alpha
Helix 8
AA8
A
153 158Right-handed 310
Helix 9
AA9
A
189 194Right-handed alpha
Helix 10
AB1
A
216 240Right-handed alpha
Helix 11
AB2
A
248 262Right-handed alpha
Helix 12
AB3
A
264 276Right-handed alpha
Helix 13
AB4
A
322 334Right-handed alpha
Helix 14
AB5
A
342 349Right-handed alpha
Helix 15
AB6
A
360 369Right-handed alpha
Helix 16
AB7
A
370 375Right-handed alpha
Helix 17
AB8
A
383 403Right-handed alpha
Helix 18
AB9
A
407 424Right-handed alpha
Helix 19
AC1
A
435 443Right-handed alpha
Helix 20
AC2
A
455 459Right-handed 310
Helix 21
AC3
A
476 480Right-handed 310
Helix 22
AC4
A
501 509Right-handed alpha
Helix 23
AC5
A
510 512Right-handed 310
Helix 24
AC6
A
514 532Right-handed alpha
Helix 25
AC7
A
535 546Right-handed alpha
Helix 26
AC8
A
546 557Right-handed alpha
Helix 27
AC9
A
560 564Right-handed 310
Helix 28
AD1
A
565 574Right-handed alpha
Helix 29
AD2
A
576 586Right-handed alpha
Helix 30
AD3
A
587 602Right-handed alpha
Helix 31
AD4
A
623 642Right-handed alpha
Helix 32
AD5
A
647 650Right-handed 310
Helix 33
AD6
A
651 664Right-handed alpha
Helix 34
AD7
A
685 710Right-handed alpha
Helix 35
AD8
A
715 732Right-handed alpha
Helix 36
AD9
A
760 773Right-handed alpha
Helix 37
AE1
A
774 782Right-handed alpha
Helix 38
AE2
A
787 807Right-handed alpha
Helix 39
AE3
A
814 825Right-handed alpha
Helix 40
AE4
A
831 846Right-handed alpha
Helix 41
AE5
A
850 862Right-handed alpha
Helix 42
AE6
A
864 869Right-handed alpha
Helix 43
AE7
A
879 881Right-handed 310
Helix 44
AE8
A
882 900Right-handed alpha
Helix 45
AE9
A
901 905Right-handed 310
Helix 46
AF1
A
909 927Right-handed alpha
Helix 47
AF2
A
933 940Right-handed alpha
Helix 48
AF3
A
941 946Right-handed alpha
Helix 49
AF4
A
947 958Right-handed alpha
Helix 50
AF5
A
977 983Right-handed 310
Helix 51
AF6
A
987 991Right-handed 310
Helix 52
AF7
A
995 1007Right-handed alpha
Helix 53
AF8
A
1009 1013Right-handed 310
Helix 54
AF9
A
1028 1032Right-handed 310
Helix 55
AG1
A
1033 1037Right-handed 310
Helix 56
AG2
A
1040 1058Right-handed alpha
Helix 57
AG3
A
1062 1082Right-handed alpha
Helix 58
AG4
A
1088 1093Right-handed alpha
Helix 59
AG5
A
1094 1104Right-handed alpha
Helix 60
AG6
A
1111 1129Right-handed alpha
Helix 61
AG7
A
1130 1142Right-handed alpha
Helix 62
AG8
A
1143 1153Right-handed alpha
Helix 63
AG9
A
1164 1194Right-handed alpha
Helix 64
AH1
A
1251 1256Right-handed alpha
Helix 65
AH2
A
1273 1286Right-handed alpha
Helix 66
AH3
A
1287 1290Right-handed 310
Helix 67
AH4
A
1301 1312Right-handed alpha
Helix 68
AH5
A
1345 1351Right-handed alpha
Helix 69
AH6
A
1354 1360Right-handed alpha
Helix 70
AH7
A
1366 1384Right-handed alpha
Helix 71
AH8
A
1388 1394Right-handed alpha
Helix 72
AH9
A
1398 1400Right-handed 310
Helix 73
AI1
A
1401 1422Right-handed alpha
Helix 74
AI2
A
1429 1433Right-handed 310
Helix 75
AI3
A
1435 1457Right-handed alpha
Helix 76
AI4
A
1477 1489Right-handed alpha
Helix 77
AI5
A
1493 1515Right-handed alpha
Helix 78
AI6
A
1522 1534Right-handed alpha
Helix 79
AI7
A
1540 1551Right-handed alpha
Helix 80
AI8
A
1561 1594Right-handed alpha
Helix 81
AI9
A
1609 1614Right-handed alpha
Helix 82
AJ1
A
1617 1630Right-handed alpha
Helix 83
AJ2
A
1634 1641Right-handed alpha
Helix 84
AJ3
A
1648 1652Right-handed 310
Helix 85
AJ4
A
1672 1677Right-handed alpha
Helix 86
AJ5
A
1715 1720Right-handed alpha
Helix 87
AJ6
A
1720 1725Right-handed alpha
Helix 88
AJ7
A
1767 1772Right-handed alpha
Helix 89
AJ8
A
1773 1775Right-handed 310
Helix 90
AJ9
A
1780 1793Right-handed alpha
Helix 91
AK1
A
1794 1805Right-handed alpha
Helix 92
AK2
A
1806 1812Right-handed 310
Helix 93
AK3
C
22 35Right-handed alpha
Helix 94
AK4
C
55 60Right-handed alpha
Helix 95
AK5
B
4 19Right-handed alpha
Helix 96
AK6
B
101 113Right-handed alpha
Helix 97
AK7
B
123 132Right-handed alpha
Helix 98
AK8
B
133 151Right-handed alpha
Helix 99
AK9
D
22 34Right-handed alpha
Helix 100
AL1
D
37 41Right-handed 310
Helix 101
AL2
D
56 60Right-handed 310
Back to top of page

There are 14 sheets in PDB entry 7MEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
162 166anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 358first strand
Strand 2
A
311 316anti-parallel
Strand 3
A
379 382anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 607first strand
Strand 2
A
610 613anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
737 741first strand
Strand 2
A
744 747anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
931 932first strand
Strand 2
A
972 975anti-parallel
Strand 3
A
959 962anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1291 1294first strand
Strand 2
A
1232 1239anti-parallel
Strand 3
A
1299 1300anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1291 1294first strand
Strand 2
A
1232 1239anti-parallel
Strand 3
A
1329 1333anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1318 1319first strand
Strand 2
A
1326 1327anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1603 1604first strand
Strand 2
A
1607 1608anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1709 1710first strand
Strand 2
A
1701 1703anti-parallel
Strand 3
A
1731 1736anti-parallel
Strand 4
A
1741 1746anti-parallel
Strand 5
A
1752 1756anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1759 1761first strand
Strand 2
A
1777 1779anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 70parallel
Strand 4
C
42 45anti-parallel
Strand 5
C
48 49anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
36 41anti-parallel
Strand 3
B
52 58anti-parallel
Strand 4
B
69 72anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
65 70parallel
Strand 4
D
42 45anti-parallel
Strand 5
D
48 49anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il