Analysis of interatomic Contacts of Structural Units in PDB entry:
7MF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MF4 entry

There is 1 chain in PDB entry 7MF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12GLY 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7MF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
24 28Right-handed 310
Helix 3
AA3
A
29 36Right-handed alpha
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
65 80Right-handed alpha
Helix 6
AA6
A
80 91Right-handed alpha
Helix 7
AA7
A
91 100Right-handed alpha
Helix 8
AA8
A
102 111Right-handed alpha
Helix 9
AA9
A
112 116Right-handed 310
Helix 10
AB1
A
124 128Right-handed 310
Helix 11
AB2
A
130 139Right-handed alpha
Helix 12
AB3
A
160 163Right-handed 310
Helix 13
AB4
A
164 180Right-handed alpha
Helix 14
AB5
A
182 184Right-handed 310
Helix 15
AB6
A
197 203Right-handed alpha
Helix 16
AB7
A
215 234Right-handed alpha
Helix 17
AB8
A
248 257Right-handed alpha
Helix 18
AB9
A
267 286Right-handed alpha
Helix 19
AC1
A
288 292Right-handed 310
Helix 20
AC2
A
300 319Right-handed alpha
Helix 21
AC3
A
321 327Right-handed alpha
Helix 22
AC4
A
347 352Right-handed alpha
Helix 23
AC5
A
359 364Right-handed alpha
Helix 24
AC6
A
368 377Right-handed alpha
Helix 25
AC7
A
392 400Right-handed alpha
Helix 26
AC8
A
421 429Right-handed alpha
Helix 27
AC9
A
457 460Right-handed 310
Helix 28
AD1
A
461 473Right-handed alpha
Helix 29
AD2
A
478 492Right-handed alpha
Helix 30
AD3
A
494 500Right-handed alpha
Helix 31
AD4
A
506 508Right-handed 310
Helix 32
AD5
A
509 528Right-handed alpha
Helix 33
AD6
A
539 551Right-handed alpha
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There are 3 sheets in PDB entry 7MF4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
186 191parallel
Strand 3
A
145 149parallel
Strand 4
A
238 241parallel
Strand 5
A
262 264parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
329 333anti-parallel
Strand 3
A
294 297parallel
Strand 4
A
380 383parallel
Strand 5
A
407 410parallel
Strand 6
A
434 437parallel
Strand 7
A
454 455parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 446first strand
Strand 2
A
449 451anti-parallel
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