Analysis of interatomic Contacts of Structural Units in PDB entry:
7MFO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MFO entry

There are 10 chains in PDB entry 7MFO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 5	ASN 352
B	LEU 3	ASN 352
C	MET 1	ASN 352
D	GLY 2	ASN 352
E	HIS 0	ASN 352
F	LEU 3	ASN 352
G	MET 1	ASN 352
H	GLY 2	ASN 352
I	LEU 3	ASN 352
J	GLY 2	ASN 352

There are145 helices in PDB entry 7MFO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	30	Right-handed alpha
Helix 2	AA2	A	38	51	Right-handed alpha
Helix 3	AA3	A	63	80	Right-handed alpha
Helix 4	AA4	A	92	101	Right-handed 310
Helix 5	AA5	A	115	120	Right-handed 310
Helix 6	AA6	A	132	135	Right-handed 310
Helix 7	AA7	A	138	150	Right-handed alpha
Helix 8	AA8	A	171	173	Right-handed 310
Helix 9	AA9	A	201	209	Right-handed alpha
Helix 10	AB1	A	214	221	Right-handed 310
Helix 11	AB2	A	233	265	Right-handed alpha
Helix 12	AB3	A	295	299	Right-handed 310
Helix 13	AB4	A	314	323	Right-handed alpha
Helix 14	AB5	A	334	352	Right-handed alpha
Helix 15	AB6	B	15	30	Right-handed alpha
Helix 16	AB7	B	38	51	Right-handed alpha
Helix 17	AB8	B	63	80	Right-handed alpha
Helix 18	AB9	B	92	101	Right-handed 310
Helix 19	AC1	B	115	120	Right-handed 310
Helix 20	AC2	B	132	135	Right-handed 310
Helix 21	AC3	B	138	150	Right-handed alpha
Helix 22	AC4	B	171	173	Right-handed 310
Helix 23	AC5	B	201	209	Right-handed alpha
Helix 24	AC6	B	214	221	Right-handed 310
Helix 25	AC7	B	233	265	Right-handed alpha
Helix 26	AC8	B	295	299	Right-handed 310
Helix 27	AC9	B	314	323	Right-handed alpha
Helix 28	AD1	B	334	352	Right-handed alpha
Helix 29	AD2	C	15	30	Right-handed alpha
Helix 30	AD3	C	38	51	Right-handed alpha
Helix 31	AD4	C	63	80	Right-handed alpha
Helix 32	AD5	C	92	101	Right-handed 310
Helix 33	AD6	C	115	120	Right-handed 310
Helix 34	AD7	C	132	135	Right-handed 310
Helix 35	AD8	C	138	150	Right-handed alpha
Helix 36	AD9	C	171	173	Right-handed 310
Helix 37	AE1	C	201	209	Right-handed alpha
Helix 38	AE2	C	214	221	Right-handed 310
Helix 39	AE3	C	233	266	Right-handed alpha
Helix 40	AE4	C	295	299	Right-handed 310
Helix 41	AE5	C	314	323	Right-handed alpha
Helix 42	AE6	C	334	352	Right-handed alpha
Helix 43	AE7	D	2	6	Right-handed 310
Helix 44	AE8	D	15	30	Right-handed alpha
Helix 45	AE9	D	38	51	Right-handed alpha
Helix 46	AF1	D	63	80	Right-handed alpha
Helix 47	AF2	D	92	101	Right-handed 310
Helix 48	AF3	D	115	120	Right-handed 310
Helix 49	AF4	D	132	135	Right-handed 310
Helix 50	AF5	D	138	150	Right-handed alpha
Helix 51	AF6	D	171	173	Right-handed 310
Helix 52	AF7	D	201	209	Right-handed alpha
Helix 53	AF8	D	214	221	Right-handed 310
Helix 54	AF9	D	233	265	Right-handed alpha
Helix 55	AG1	D	295	299	Right-handed 310
Helix 56	AG2	D	314	323	Right-handed alpha
Helix 57	AG3	D	334	352	Right-handed alpha
Helix 58	AG4	E	2	6	Right-handed 310
Helix 59	AG5	E	15	30	Right-handed alpha
Helix 60	AG6	E	38	51	Right-handed alpha
Helix 61	AG7	E	63	80	Right-handed alpha
Helix 62	AG8	E	92	101	Right-handed 310
Helix 63	AG9	E	115	120	Right-handed 310
Helix 64	AH1	E	132	135	Right-handed 310
Helix 65	AH2	E	138	150	Right-handed alpha
Helix 66	AH3	E	171	173	Right-handed 310
Helix 67	AH4	E	201	209	Right-handed alpha
Helix 68	AH5	E	214	221	Right-handed 310
Helix 69	AH6	E	233	264	Right-handed alpha
Helix 70	AH7	E	295	299	Right-handed 310
Helix 71	AH8	E	314	323	Right-handed alpha
Helix 72	AH9	E	334	351	Right-handed alpha
Helix 73	AI1	F	15	30	Right-handed alpha
Helix 74	AI2	F	37	51	Right-handed alpha
Helix 75	AI3	F	63	80	Right-handed alpha
Helix 76	AI4	F	92	101	Right-handed 310
Helix 77	AI5	F	115	120	Right-handed 310
Helix 78	AI6	F	132	135	Right-handed 310
Helix 79	AI7	F	138	150	Right-handed alpha
Helix 80	AI8	F	171	173	Right-handed 310
Helix 81	AI9	F	201	209	Right-handed alpha
Helix 82	AJ1	F	214	221	Right-handed 310
Helix 83	AJ2	F	233	265	Right-handed alpha
Helix 84	AJ3	F	295	299	Right-handed 310
Helix 85	AJ4	F	314	323	Right-handed alpha
Helix 86	AJ5	F	334	352	Right-handed alpha
Helix 87	AJ6	G	2	6	Right-handed 310
Helix 88	AJ7	G	15	30	Right-handed alpha
Helix 89	AJ8	G	37	50	Right-handed alpha
Helix 90	AJ9	G	63	80	Right-handed alpha
Helix 91	AK1	G	92	101	Right-handed 310
Helix 92	AK2	G	115	119	Right-handed 310
Helix 93	AK3	G	132	135	Right-handed 310
Helix 94	AK4	G	138	150	Right-handed alpha
Helix 95	AK5	G	171	173	Right-handed 310
Helix 96	AK6	G	201	209	Right-handed alpha
Helix 97	AK7	G	214	221	Right-handed 310
Helix 98	AK8	G	233	265	Right-handed alpha
Helix 99	AK9	G	295	299	Right-handed 310
Helix 100	AL1	G	314	323	Right-handed alpha
Helix 101	AL2	G	334	352	Right-handed alpha
Helix 102	AL3	H	2	6	Right-handed 310
Helix 103	AL4	H	15	30	Right-handed alpha
Helix 104	AL5	H	38	51	Right-handed alpha
Helix 105	AL6	H	63	80	Right-handed alpha
Helix 106	AL7	H	92	101	Right-handed 310
Helix 107	AL8	H	115	120	Right-handed 310
Helix 108	AL9	H	132	135	Right-handed 310
Helix 109	AM1	H	138	150	Right-handed alpha
Helix 110	AM2	H	171	173	Right-handed 310
Helix 111	AM3	H	201	210	Right-handed alpha
Helix 112	AM4	H	214	221	Right-handed 310
Helix 113	AM5	H	233	265	Right-handed alpha
Helix 114	AM6	H	295	299	Right-handed 310
Helix 115	AM7	H	314	323	Right-handed alpha
Helix 116	AM8	H	334	351	Right-handed alpha
Helix 117	AM9	I	15	30	Right-handed alpha
Helix 118	AN1	I	38	50	Right-handed alpha
Helix 119	AN2	I	63	80	Right-handed alpha
Helix 120	AN3	I	92	101	Right-handed 310
Helix 121	AN4	I	115	120	Right-handed 310
Helix 122	AN5	I	132	135	Right-handed 310
Helix 123	AN6	I	138	150	Right-handed alpha
Helix 124	AN7	I	171	173	Right-handed 310
Helix 125	AN8	I	201	209	Right-handed alpha
Helix 126	AN9	I	214	221	Right-handed 310
Helix 127	AO1	I	233	265	Right-handed alpha
Helix 128	AO2	I	295	299	Right-handed 310
Helix 129	AO3	I	314	323	Right-handed alpha
Helix 130	AO4	I	334	351	Right-handed alpha
Helix 131	AO5	J	2	6	Right-handed 310
Helix 132	AO6	J	15	30	Right-handed alpha
Helix 133	AO7	J	38	51	Right-handed alpha
Helix 134	AO8	J	63	80	Right-handed alpha
Helix 135	AO9	J	92	101	Right-handed 310
Helix 136	AP1	J	115	120	Right-handed 310
Helix 137	AP2	J	132	135	Right-handed 310
Helix 138	AP3	J	138	150	Right-handed alpha
Helix 139	AP4	J	171	173	Right-handed 310
Helix 140	AP5	J	201	209	Right-handed alpha
Helix 141	AP6	J	214	221	Right-handed 310
Helix 142	AP7	J	233	264	Right-handed alpha
Helix 143	AP8	J	295	299	Right-handed 310
Helix 144	AP9	J	314	323	Right-handed alpha
Helix 145	AQ1	J	334	352	Right-handed alpha

There are 30 sheets in PDB entry 7MFO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	61	first strand
Strand 2	A	193	198	anti-parallel
Strand 3	A	176	180	anti-parallel
Strand 4	A	152	156	parallel
Strand 5	A	126	130	parallel
Strand 6	A	85	88	parallel
Strand 7	A	104	106	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	165	first strand
Strand 2	A	168	169	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	272	first strand
Strand 2	A	286	290	anti-parallel
Strand 3	A	324	327	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	61	first strand
Strand 2	B	193	198	anti-parallel
Strand 3	B	176	180	anti-parallel
Strand 4	B	152	156	parallel
Strand 5	B	126	130	parallel
Strand 6	B	85	88	parallel
Strand 7	B	104	106	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	165	first strand
Strand 2	B	168	169	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	272	first strand
Strand 2	B	285	290	anti-parallel
Strand 3	B	324	328	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	61	first strand
Strand 2	C	193	198	anti-parallel
Strand 3	C	176	180	anti-parallel
Strand 4	C	152	156	parallel
Strand 5	C	126	130	parallel
Strand 6	C	85	88	parallel
Strand 7	C	104	106	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	168	169	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	272	first strand
Strand 2	C	286	290	anti-parallel
Strand 3	C	324	327	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	61	first strand
Strand 2	D	193	198	anti-parallel
Strand 3	D	176	180	anti-parallel
Strand 4	D	152	156	parallel
Strand 5	D	126	130	parallel
Strand 6	D	85	88	parallel
Strand 7	D	104	106	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	165	first strand
Strand 2	D	168	169	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	272	first strand
Strand 2	D	286	290	anti-parallel
Strand 3	D	324	327	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	61	first strand
Strand 2	E	193	198	anti-parallel
Strand 3	E	176	180	anti-parallel
Strand 4	E	152	156	parallel
Strand 5	E	126	130	parallel
Strand 6	E	85	88	parallel
Strand 7	E	104	106	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	164	165	first strand
Strand 2	E	168	169	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	272	first strand
Strand 2	E	285	290	anti-parallel
Strand 3	E	324	328	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	61	first strand
Strand 2	F	193	198	anti-parallel
Strand 3	F	176	180	anti-parallel
Strand 4	F	152	156	parallel
Strand 5	F	126	130	parallel
Strand 6	F	85	88	parallel
Strand 7	F	104	106	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	164	165	first strand
Strand 2	F	168	169	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	270	272	first strand
Strand 2	F	285	290	anti-parallel
Strand 3	F	324	328	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	61	first strand
Strand 2	G	193	198	anti-parallel
Strand 3	G	176	180	anti-parallel
Strand 4	G	152	156	parallel
Strand 5	G	126	130	parallel
Strand 6	G	85	88	parallel
Strand 7	G	104	106	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	164	165	first strand
Strand 2	G	168	169	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	270	272	first strand
Strand 2	G	285	290	anti-parallel
Strand 3	G	324	328	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	61	first strand
Strand 2	H	193	198	anti-parallel
Strand 3	H	176	180	anti-parallel
Strand 4	H	152	156	parallel
Strand 5	H	126	130	parallel
Strand 6	H	85	88	parallel
Strand 7	H	104	106	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	164	165	first strand
Strand 2	H	168	169	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	272	first strand
Strand 2	H	285	290	anti-parallel
Strand 3	H	324	328	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	61	first strand
Strand 2	I	193	198	anti-parallel
Strand 3	I	176	180	anti-parallel
Strand 4	I	152	156	parallel
Strand 5	I	126	130	parallel
Strand 6	I	85	88	parallel
Strand 7	I	104	106	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	164	165	first strand
Strand 2	I	168	169	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	270	272	first strand
Strand 2	I	285	290	anti-parallel
Strand 3	I	324	328	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	56	61	first strand
Strand 2	J	193	198	anti-parallel
Strand 3	J	176	180	anti-parallel
Strand 4	J	152	156	parallel
Strand 5	J	126	130	parallel
Strand 6	J	85	88	parallel
Strand 7	J	104	106	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	164	165	first strand
Strand 2	J	168	169	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	270	272	first strand
Strand 2	J	286	290	anti-parallel
Strand 3	J	324	327	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MFO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MFO