Analysis of interatomic Contacts of Structural Units in PDB entry:
7MFT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MFT entry

There are 3 chains in PDB entry 7MFT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 15	ILE 424
G	CYS 22	LYS 1504
I	LYS 3	LEU 492

There are 97 helices in PDB entry 7MFT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	33	Right-handed alpha
Helix 2	AA2	A	35	43	Right-handed alpha
Helix 3	AA3	A	90	109	Right-handed alpha
Helix 4	AA4	A	127	143	Right-handed alpha
Helix 5	AA5	A	160	176	Right-handed alpha
Helix 6	AA6	A	179	183	Right-handed 310
Helix 7	AA7	A	198	216	Right-handed alpha
Helix 8	AA8	A	230	244	Right-handed alpha
Helix 9	AA9	A	264	272	Right-handed alpha
Helix 10	AB1	A	287	294	Right-handed alpha
Helix 11	AB2	A	309	314	Right-handed alpha
Helix 12	AB3	A	330	341	Right-handed alpha
Helix 13	AB4	A	346	351	Right-handed alpha
Helix 14	AB5	A	352	368	Right-handed alpha
Helix 15	AB6	A	372	398	Right-handed alpha
Helix 16	AB7	A	401	422	Right-handed alpha
Helix 17	AB8	G	35	50	Right-handed alpha
Helix 18	AB9	G	51	53	Right-handed 310
Helix 19	AC1	G	72	80	Right-handed alpha
Helix 20	AC2	G	102	120	Right-handed alpha
Helix 21	AC3	G	132	136	Right-handed 310
Helix 22	AC4	G	137	143	Right-handed alpha
Helix 23	AC5	G	160	183	Right-handed alpha
Helix 24	AC6	G	203	211	Right-handed alpha
Helix 25	AC7	G	212	216	Right-handed 310
Helix 26	AC8	G	257	268	Right-handed alpha
Helix 27	AC9	G	277	282	Right-handed alpha
Helix 28	AD1	G	291	306	Right-handed alpha
Helix 29	AD2	G	309	318	Right-handed alpha
Helix 30	AD3	G	329	341	Right-handed alpha
Helix 31	AD4	G	421	432	Right-handed alpha
Helix 32	AD5	G	434	443	Right-handed alpha
Helix 33	AD6	G	460	469	Right-handed alpha
Helix 34	AD7	G	471	479	Right-handed alpha
Helix 35	AD8	G	479	486	Right-handed alpha
Helix 36	AD9	G	508	511	Right-handed 310
Helix 37	AE1	G	530	534	Right-handed 310
Helix 38	AE2	G	565	575	Right-handed alpha
Helix 39	AE3	G	592	611	Right-handed alpha
Helix 40	AE4	G	630	646	Right-handed alpha
Helix 41	AE5	G	647	651	Right-handed 310
Helix 42	AE6	G	662	673	Right-handed alpha
Helix 43	AE7	G	679	693	Right-handed alpha
Helix 44	AE8	G	698	722	Right-handed alpha
Helix 45	AE9	G	725	732	Right-handed alpha
Helix 46	AF1	G	741	749	Right-handed alpha
Helix 47	AF2	G	760	778	Right-handed alpha
Helix 48	AF3	G	802	816	Right-handed alpha
Helix 49	AF4	G	817	830	Right-handed alpha
Helix 50	AF5	G	835	838	Right-handed 310
Helix 51	AF6	G	856	862	Right-handed alpha
Helix 52	AF7	G	875	890	Right-handed alpha
Helix 53	AF8	G	901	906	Right-handed 310
Helix 54	AF9	G	929	935	Right-handed alpha
Helix 55	AG1	G	961	969	Right-handed alpha
Helix 56	AG2	G	987	1002	Right-handed alpha
Helix 57	AG3	G	1016	1027	Right-handed alpha
Helix 58	AG4	G	1046	1051	Right-handed alpha
Helix 59	AG5	G	1055	1071	Right-handed alpha
Helix 60	AG6	G	1072	1076	Right-handed 310
Helix 61	AG7	G	1086	1097	Right-handed alpha
Helix 62	AG8	G	1104	1112	Right-handed alpha
Helix 63	AG9	G	1132	1137	Right-handed alpha
Helix 64	AH1	G	1142	1165	Right-handed alpha
Helix 65	AH2	G	1168	1173	Right-handed alpha
Helix 66	AH3	G	1175	1177	Right-handed 310
Helix 67	AH4	G	1182	1188	Right-handed alpha
Helix 68	AH5	G	1190	1194	Right-handed 310
Helix 69	AH6	G	1220	1226	Right-handed alpha
Helix 70	AH7	G	1227	1229	Right-handed 310
Helix 71	AH8	G	1230	1237	Right-handed alpha
Helix 72	AH9	G	1254	1265	Right-handed alpha
Helix 73	AI1	G	1409	1417	Right-handed alpha
Helix 74	AI2	G	1429	1448	Right-handed alpha
Helix 75	AI3	G	1449	1458	Right-handed alpha
Helix 76	AI4	G	1458	1465	Right-handed alpha
Helix 77	AI5	G	1471	1488	Right-handed alpha
Helix 78	AI6	G	1490	1503	Right-handed alpha
Helix 79	AI7	I	5	10	Right-handed alpha
Helix 80	AI8	I	19	24	Right-handed alpha
Helix 81	AI9	I	35	46	Right-handed alpha
Helix 82	AJ1	I	72	83	Right-handed alpha
Helix 83	AJ2	I	84	96	Right-handed alpha
Helix 84	AJ3	I	98	106	Right-handed alpha
Helix 85	AJ4	I	108	113	Right-handed alpha
Helix 86	AJ5	I	114	118	Right-handed 310
Helix 87	AJ6	I	124	140	Right-handed alpha
Helix 88	AJ7	I	161	175	Right-handed alpha
Helix 89	AJ8	I	188	192	Right-handed 310
Helix 90	AJ9	I	201	216	Right-handed alpha
Helix 91	AK1	I	230	238	Right-handed alpha
Helix 92	AK2	I	266	281	Right-handed alpha
Helix 93	AK3	I	301	314	Right-handed alpha
Helix 94	AK4	I	351	358	Right-handed alpha
Helix 95	AK5	I	404	407	Right-handed 310
Helix 96	AK6	I	459	464	Right-handed alpha
Helix 97	AK7	I	467	488	Right-handed alpha

There are 21 sheets in PDB entry 7MFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	62	71	anti-parallel
Strand 3	A	52	56	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	62	71	anti-parallel
Strand 3	A	115	119	anti-parallel
Strand 4	A	83	84	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	256	first strand
Strand 2	A	246	252	anti-parallel
Strand 3	A	223	227	parallel
Strand 4	A	298	301	parallel
Strand 5	A	320	322	parallel
Strand 6	A	343	345	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	196	200	first strand
Strand 2	G	65	69	anti-parallel
Strand 3	G	225	228	anti-parallel
Strand 4	G	23	29	anti-parallel
Strand 5	G	381	385	anti-parallel
Strand 6	G	373	377	anti-parallel
Strand 7	G	398	403	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	128	first strand
Strand 2	G	146	152	anti-parallel
Strand 3	G	92	98	anti-parallel
Strand 4	G	187	192	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	351	352	first strand
Strand 2	G	363	364	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	359	360	first strand
Strand 2	G	411	413	anti-parallel
Strand 3	G	418	420	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	490	491	first strand
Strand 2	G	1044	1045	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	513	514	first strand
Strand 2	G	736	737	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	538	540	first strand
Strand 2	G	557	559	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	582	586	first strand
Strand 2	G	614	618	parallel
Strand 3	G	653	656	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	588	589	first strand
Strand 2	G	627	628	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	840	842	first strand
Strand 2	G	1179	1181	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	864	865	first strand
Strand 2	G	1100	1102	parallel
Strand 3	G	1077	1081	parallel
Strand 4	G	1031	1035	parallel
Strand 5	G	1006	1012	parallel
Strand 6	G	938	941	parallel
Strand 7	G	918	921	parallel
Strand 8	G	894	895	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	953	955	first strand
Strand 2	G	976	978	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1240	1245	first strand
Strand 2	G	1275	1280	parallel
Strand 3	G	1295	1300	parallel
Strand 4	G	1315	1319	parallel
Strand 5	G	1348	1349	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1345	1346	first strand
Strand 2	G	1364	1368	parallel
Strand 3	G	1383	1386	parallel
Strand 4	G	1402	1406	parallel
Strand 5	G	1466	1470	anti-parallel
Strand 6	G	1423	1425	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	241	243	first strand
Strand 2	I	455	457	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	263	265	first strand
Strand 2	I	414	417	parallel
Strand 3	I	295	298	parallel
Strand 4	I	319	323	parallel
Strand 5	I	366	367	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	383	385	first strand
Strand 2	I	408	410	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	388	393	first strand
Strand 2	I	397	402	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MFT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MFT