Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MGE entry

There are 4 chains in PDB entry 7MGE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 29	LEU 457
B	ALA 51	LYS 936
C	ALA 13	GLY 465
E	ALA 15	GLN 180

There are 44 helices in PDB entry 7MGE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	434	443	Right-handed alpha
Helix 2	AA2	A	445	453	Right-handed alpha
Helix 3	AA3	B	98	105	Right-handed alpha
Helix 4	AA4	B	161	219	Right-handed alpha
Helix 5	AA5	B	226	252	Right-handed alpha
Helix 6	AA6	B	330	344	Right-handed alpha
Helix 7	AA7	B	348	363	Right-handed alpha
Helix 8	AA8	B	367	371	Right-handed 310
Helix 9	AA9	B	707	714	Right-handed alpha
Helix 10	AB1	B	720	730	Right-handed alpha
Helix 11	AB2	B	739	750	Right-handed alpha
Helix 12	AB3	B	751	754	Right-handed 310
Helix 13	AB4	B	774	778	Right-handed 310
Helix 14	AB5	B	796	801	Right-handed alpha
Helix 15	AB6	B	802	804	Right-handed 310
Helix 16	AB7	B	825	831	Right-handed alpha
Helix 17	AB8	B	840	863	Right-handed alpha
Helix 18	AB9	B	864	869	Right-handed alpha
Helix 19	AC1	B	877	891	Right-handed alpha
Helix 20	AC2	B	895	898	Right-handed 310
Helix 21	AC3	B	899	915	Right-handed alpha
Helix 22	AC4	C	55	68	Right-handed alpha
Helix 23	AC5	C	124	126	Right-handed 310
Helix 24	AC6	C	127	148	Right-handed alpha
Helix 25	AC7	C	173	179	Right-handed alpha
Helix 26	AC8	C	180	190	Right-handed alpha
Helix 27	AC9	C	191	193	Right-handed 310
Helix 28	AD1	C	213	230	Right-handed alpha
Helix 29	AD2	C	241	252	Right-handed alpha
Helix 30	AD3	C	253	255	Right-handed 310
Helix 31	AD4	C	256	261	Right-handed alpha
Helix 32	AD5	C	294	300	Right-handed alpha
Helix 33	AD6	C	375	385	Right-handed alpha
Helix 34	AD7	C	392	419	Right-handed alpha
Helix 35	AD8	C	430	437	Right-handed alpha
Helix 36	AD9	C	441	454	Right-handed alpha
Helix 37	AE1	C	458	465	Right-handed alpha
Helix 38	AE2	E	29	39	Right-handed alpha
Helix 39	AE3	E	74	82	Right-handed 310
Helix 40	AE4	E	99	112	Right-handed alpha
Helix 41	AE5	E	113	117	Right-handed 310
Helix 42	AE6	E	135	144	Right-handed alpha
Helix 43	AE7	E	145	148	Right-handed 310
Helix 44	AE8	E	165	178	Right-handed alpha

There are 15 sheets in PDB entry 7MGE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	428	432	anti-parallel
Strand 3	A	419	421	anti-parallel
Strand 4	A	411	413	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	91	first strand
Strand 2	A	107	110	anti-parallel
Strand 3	A	115	117	anti-parallel
Strand 4	A	128	130	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	142	first strand
Strand 2	A	147	149	anti-parallel
Strand 3	A	156	158	anti-parallel
Strand 4	A	164	167	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	182	first strand
Strand 2	A	186	191	anti-parallel
Strand 3	A	194	201	anti-parallel
Strand 4	A	211	218	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	235	239	anti-parallel
Strand 3	A	245	249	anti-parallel
Strand 4	A	258	259	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	291	first strand
Strand 2	A	296	300	anti-parallel
Strand 3	A	303	307	anti-parallel
Strand 4	A	314	318	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	332	first strand
Strand 2	A	336	341	anti-parallel
Strand 3	A	345	350	anti-parallel
Strand 4	A	396	402	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	138	first strand
Strand 2	B	152	158	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	784	785	first strand
Strand 2	B	732	736	parallel
Strand 3	B	807	811	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	17	first strand
Strand 2	C	45	47	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	29	first strand
Strand 2	C	113	117	anti-parallel
Strand 3	C	92	101	anti-parallel
Strand 4	C	81	85	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	29	first strand
Strand 2	C	113	117	anti-parallel
Strand 3	C	92	101	anti-parallel
Strand 4	C	108	110	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	264	first strand
Strand 2	C	280	282	parallel
Strand 3	C	234	237	parallel
Strand 4	C	307	309	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	20	first strand
Strand 2	E	61	67	parallel
Strand 3	E	52	58	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	24	first strand
Strand 2	E	87	92	parallel
Strand 3	E	120	125	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MGE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGE