Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MGQ entry

There are 3 chains in PDB entry 7MGQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	HIS 605
B	GLU 4	HIS 605
C	GLU 4	THR 131

There are113 helices in PDB entry 7MGQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	28	Right-handed alpha
Helix 2	AA2	A	35	45	Right-handed alpha
Helix 3	AA3	A	52	57	Right-handed alpha
Helix 4	AA4	A	61	65	Right-handed 310
Helix 5	AA5	A	70	79	Right-handed alpha
Helix 6	AA6	A	82	92	Right-handed alpha
Helix 7	AA7	A	106	111	Right-handed alpha
Helix 8	AA8	A	117	125	Right-handed alpha
Helix 9	AA9	A	127	139	Right-handed alpha
Helix 10	AB1	A	148	150	Right-handed 310
Helix 11	AB2	A	151	163	Right-handed alpha
Helix 12	AB3	A	166	196	Right-handed alpha
Helix 13	AB4	A	202	206	Right-handed 310
Helix 14	AB5	A	248	270	Right-handed alpha
Helix 15	AB6	A	292	300	Right-handed alpha
Helix 16	AB7	A	308	320	Right-handed alpha
Helix 17	AB8	A	337	347	Right-handed alpha
Helix 18	AB9	A	358	367	Right-handed alpha
Helix 19	AC1	A	368	372	Right-handed 310
Helix 20	AC2	A	407	412	Right-handed 310
Helix 21	AC3	A	422	438	Right-handed alpha
Helix 22	AC4	A	461	479	Right-handed alpha
Helix 23	AC5	A	481	486	Right-handed alpha
Helix 24	AC6	A	494	507	Right-handed alpha
Helix 25	AC7	A	514	523	Right-handed alpha
Helix 26	AC8	A	533	542	Right-handed alpha
Helix 27	AC9	A	558	566	Right-handed alpha
Helix 28	AD1	A	580	591	Right-handed alpha
Helix 29	AD2	B	17	28	Right-handed alpha
Helix 30	AD3	B	35	45	Right-handed alpha
Helix 31	AD4	B	52	57	Right-handed alpha
Helix 32	AD5	B	61	65	Right-handed 310
Helix 33	AD6	B	70	79	Right-handed alpha
Helix 34	AD7	B	82	92	Right-handed alpha
Helix 35	AD8	B	106	111	Right-handed alpha
Helix 36	AD9	B	117	125	Right-handed alpha
Helix 37	AE1	B	127	139	Right-handed alpha
Helix 38	AE2	B	148	150	Right-handed 310
Helix 39	AE3	B	151	163	Right-handed alpha
Helix 40	AE4	B	166	196	Right-handed alpha
Helix 41	AE5	B	202	206	Right-handed 310
Helix 42	AE6	B	248	270	Right-handed alpha
Helix 43	AE7	B	292	300	Right-handed alpha
Helix 44	AE8	B	308	320	Right-handed alpha
Helix 45	AE9	B	337	347	Right-handed alpha
Helix 46	AF1	B	358	367	Right-handed alpha
Helix 47	AF2	B	368	372	Right-handed 310
Helix 48	AF3	B	407	412	Right-handed 310
Helix 49	AF4	B	422	438	Right-handed alpha
Helix 50	AF5	B	461	479	Right-handed alpha
Helix 51	AF6	B	481	486	Right-handed alpha
Helix 52	AF7	B	497	507	Right-handed alpha
Helix 53	AF8	B	508	513	Right-handed 310
Helix 54	AF9	B	521	525	Right-handed 310
Helix 55	AG1	B	533	543	Right-handed alpha
Helix 56	AG2	B	558	566	Right-handed alpha
Helix 57	AG3	B	580	591	Right-handed alpha
Helix 58	AG4	C	17	28	Right-handed alpha
Helix 59	AG5	C	35	45	Right-handed alpha
Helix 60	AG6	C	52	57	Right-handed alpha
Helix 61	AG7	C	61	65	Right-handed 310
Helix 62	AG8	C	70	79	Right-handed alpha
Helix 63	AG9	C	82	92	Right-handed alpha
Helix 64	AH1	C	106	111	Right-handed alpha
Helix 65	AH2	C	117	125	Right-handed alpha
Helix 66	AH3	C	127	139	Right-handed alpha
Helix 67	AH4	C	148	150	Right-handed 310
Helix 68	AH5	C	151	163	Right-handed alpha
Helix 69	AH6	C	166	196	Right-handed alpha
Helix 70	AH7	C	202	206	Right-handed 310
Helix 71	AH8	C	248	270	Right-handed alpha
Helix 72	AH9	C	292	300	Right-handed alpha
Helix 73	AI1	C	308	320	Right-handed alpha
Helix 74	AI2	C	337	347	Right-handed alpha
Helix 75	AI3	C	358	367	Right-handed alpha
Helix 76	AI4	C	368	372	Right-handed 310
Helix 77	AI5	C	407	412	Right-handed 310
Helix 78	AI6	C	422	438	Right-handed alpha
Helix 79	AI7	C	461	479	Right-handed alpha
Helix 80	AI8	C	481	486	Right-handed alpha
Helix 81	AI9	C	494	507	Right-handed alpha
Helix 82	AJ1	C	518	523	Right-handed alpha
Helix 83	AJ2	C	533	542	Right-handed alpha
Helix 84	AJ3	C	558	566	Right-handed alpha
Helix 85	AJ4	C	580	591	Right-handed alpha
Helix 86	AJ5	D	17	28	Right-handed alpha
Helix 87	AJ6	D	35	45	Right-handed alpha
Helix 88	AJ7	D	52	57	Right-handed alpha
Helix 89	AJ8	D	61	65	Right-handed 310
Helix 90	AJ9	D	70	79	Right-handed alpha
Helix 91	AK1	D	82	92	Right-handed alpha
Helix 92	AK2	D	106	113	Right-handed alpha
Helix 93	AK3	D	117	125	Right-handed alpha
Helix 94	AK4	D	127	139	Right-handed alpha
Helix 95	AK5	D	148	150	Right-handed 310
Helix 96	AK6	D	151	163	Right-handed alpha
Helix 97	AK7	D	166	196	Right-handed alpha
Helix 98	AK8	D	202	206	Right-handed 310
Helix 99	AK9	D	248	270	Right-handed alpha
Helix 100	AL1	D	292	300	Right-handed alpha
Helix 101	AL2	D	308	320	Right-handed alpha
Helix 102	AL3	D	337	347	Right-handed alpha
Helix 103	AL4	D	358	367	Right-handed alpha
Helix 104	AL5	D	368	372	Right-handed 310
Helix 105	AL6	D	407	412	Right-handed 310
Helix 106	AL7	D	422	438	Right-handed alpha
Helix 107	AL8	D	461	479	Right-handed alpha
Helix 108	AL9	D	481	486	Right-handed alpha
Helix 109	AM1	D	494	507	Right-handed alpha
Helix 110	AM2	D	515	523	Right-handed alpha
Helix 111	AM3	D	533	542	Right-handed alpha
Helix 112	AM4	D	558	566	Right-handed alpha
Helix 113	AM5	D	580	591	Right-handed alpha

There are 16 sheets in PDB entry 7MGQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	51	first strand
Strand 2	A	31	34	parallel
Strand 3	A	7	12	parallel
Strand 4	A	99	103	parallel
Strand 5	A	144	146	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	218	first strand
Strand 2	A	229	232	anti-parallel
Strand 3	B	395	400	anti-parallel
Strand 4	B	387	392	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	374	378	anti-parallel
Strand 3	A	349	354	parallel
Strand 4	A	328	332	parallel
Strand 5	A	273	277	anti-parallel
Strand 6	A	282	287	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	392	first strand
Strand 2	A	395	400	anti-parallel
Strand 3	B	229	232	anti-parallel
Strand 4	B	215	218	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	456	first strand
Strand 2	A	444	448	anti-parallel
Strand 3	A	547	551	anti-parallel
Strand 4	A	569	575	parallel
Strand 5	A	594	598	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	51	first strand
Strand 2	B	31	34	parallel
Strand 3	B	7	12	parallel
Strand 4	B	97	103	parallel
Strand 5	B	144	146	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	374	378	anti-parallel
Strand 3	B	349	354	parallel
Strand 4	B	328	332	parallel
Strand 5	B	273	277	anti-parallel
Strand 6	B	282	287	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	456	first strand
Strand 2	B	444	448	anti-parallel
Strand 3	B	547	551	anti-parallel
Strand 4	B	569	575	parallel
Strand 5	B	594	598	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	51	first strand
Strand 2	C	31	34	parallel
Strand 3	C	7	12	parallel
Strand 4	C	99	103	parallel
Strand 5	C	144	146	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	218	first strand
Strand 2	C	229	232	anti-parallel
Strand 3	D	395	400	anti-parallel
Strand 4	D	387	392	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	374	378	anti-parallel
Strand 3	C	349	354	parallel
Strand 4	C	328	332	parallel
Strand 5	C	273	277	anti-parallel
Strand 6	C	282	287	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	387	392	first strand
Strand 2	C	395	400	anti-parallel
Strand 3	D	229	232	anti-parallel
Strand 4	D	215	218	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	457	first strand
Strand 2	C	443	448	anti-parallel
Strand 3	C	547	551	anti-parallel
Strand 4	C	569	575	parallel
Strand 5	C	594	598	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	51	first strand
Strand 2	D	31	34	parallel
Strand 3	D	7	12	parallel
Strand 4	D	99	103	parallel
Strand 5	D	144	146	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	374	378	anti-parallel
Strand 3	D	349	354	parallel
Strand 4	D	328	332	parallel
Strand 5	D	273	277	anti-parallel
Strand 6	D	282	287	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	459	first strand
Strand 2	D	442	448	anti-parallel
Strand 3	D	547	551	anti-parallel
Strand 4	D	569	575	parallel
Strand 5	D	594	598	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MGQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGQ